Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1215 ATGGACCTAGATTTGCGGAAAAGTGGCCATGGCATTGGCAGCAATGCATCACTGCAATCCAATCTTGTGCTGTATTCTTACTGTCATAGCTCTTGCTCATGGCGTATTCGATTTGCTTTATCCCTCAAAGGGATCCCATATGAGTACAAAGCAGTGGATCTTTCAAAAGGAGAGCAGTACAGTCCAGAATTCGAGAGATTGAATCCTCTGCACTATGTTCCAGTATTGGTTGATGATAATGTGGTGGTTTCAGACTCTTATGCAATATTTCTGCATTTGGAGGAAAAATATACTCAGAAGCCACTGTTGCCAGTTGATCCTCAGCTTAGAGCTCTCAATCTTCAGGTAGCTAGTATTATTCACTCCAGTATACAGCCTCTTCATATGCTTAATGTTCTGAAAGATATGGAGAAAATGTTTTGTGCAGAATCAAAACCATGGGCCCAATTTACCATTGACAAAGGTTTCTCAGCTCTTGAAAAATTACTGAAGGATTTTGCTGGTACATATGCCACAGGAGAACATATCTATATGGCTGATGTGTTTTTGGCCCCACAGATTACACTGGCAGTTCAGAGATTTGATATTGATATGTCCAAATTCCCTACCCTTAGTAGATTGTATGAAACATACAAAGCTTTGCCAGAGTTCCAAGCCTCATCACCACAAAGACAACCTGATGCCTTGATTCATAACCCTTGA 702 0.4074 MDLDLRKSGHGIGSNASLQSNLVLYSYCHSSCSWRIRFALSLKGIPYEYKAVDLSKGEQYSPEFERLNPLHYVPVLVDDNVVVSDSYAIFLHLEEKYTQKPLLPVDPQLRALNLQVASIIHSSIQPLHMLNVLKDMEKMFCAESKPWAQFTIDKGFSALEKLLKDFAGTYATGEHIYMADVFLAPQITLAVQRFDIDMSKFPTLSRLYETYKALPEFQASSPQRQPDALIHNP* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1215 233 SFLD Glutathione Transferase (cytosolic) 22 212 IPR040079 -
Gso1g1215 233 SFLD Main (cytGST) 22 212 - -
Gso1g1215 233 PANTHER MALEYLACETOACETATE ISOMERASE 12 229 - -
Gso1g1215 233 PANTHER GLUTATHIONE S-TRANSFERASE 2-LIKE ISOFORM X1 12 229 - -
Gso1g1215 233 Pfam Glutathione S-transferase, N-terminal domain 24 101 IPR004045 -
Gso1g1215 233 TIGRFAM maiA: maleylacetoacetate isomerase 24 228 IPR005955 GO:0003824|GO:0005737|GO:0009072
Gso1g1215 233 Pfam Glutathione S-transferase, C-terminal domain 142 218 IPR004046 -
Gso1g1215 233 Gene3D Glutaredoxin 24 99 - -
Gso1g1215 233 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 20 101 IPR004045 -
Gso1g1215 233 CDD GST_C_Zeta 107 225 IPR034330 -
Gso1g1215 233 Gene3D - 103 229 - -
Gso1g1215 233 SUPERFAMILY Thioredoxin-like 21 104 IPR036249 -
Gso1g1215 233 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 106 230 IPR010987 -
Gso1g1215 233 SUPERFAMILY GST C-terminal domain-like 101 228 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1215 Gso-Chr1 48125278 48130084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1215 19 228 Glutathione S-transferase Gene Family AT2G02380 50.711 3.36e-72 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1215 K01800 - gmx:100796296 460.685