Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1203 ATGTTGAAGTCCCTGGTCACAATTATTGTATTCTTGTTGATTGTCCGTGCTCAAGATGATTTGGGTGATGATTCAATTTTTGACGGGAGGAAAACTGTGTGTGTTTTAAATGGGATGAATGATGACATTCTTGTGTATCTCCATTGTCAGTCGAGGTACAATGATCTTGGCCAACATGTTCTTGCCGTTGGAGAGTACCAAGAATGGTCCTTTAGAGATAATATTCGTGACACAACTCTCTTTTGGTGCACGATGGATGCAGGCAAGGTGCATGCGAGTTTTCAAGTTTATCGTGCCGAAATTGAGGAGAAGTTATGTGATTCCCAATGCAATCGAACTCTAACAAACGATGGAGGCTATTTTTATGATCAGTTCCATGGCTATTGGGAGAAGAGATTATCATGGTATATTCCATAA 417 0.4029 MLKSLVTIIVFLLIVRAQDDLGDDSIFDGRKTVCVLNGMNDDILVYLHCQSRYNDLGQHVLAVGEYQEWSFRDNIRDTTLFWCTMDAGKVHASFQVYRAEIEEKLCDSQCNRTLTNDGGYFYDQFHGYWEKRLSWYIP* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1203 138 Pfam Plant self-incompatibility protein S1 32 135 IPR010264 -
Gso1g1203 138 PANTHER - 18 121 IPR010264 -
Gso1g1203 138 PANTHER PUMILIO HOMOLOG 15-LIKE 18 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1203 Gso-Chr1 47773130 47773546 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1203 8 112 Carbohydrate Esterase AT3G16970 26.606 1.64e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1203 - - gmx:102662948 295.819