Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1201 ATGTTGAAGTCCCTGGTCACAATTATTGTATTCTTGTTGATTGTTCGTGCTCAAGATGATCTGGGTGATGATTCTGTTTTTGATGGAAAGAAAACTGTGCGTGTTTTAAATGCGATGAATGATGGCATTCTTGTGTATCTCCATTGTCGGTCGAGGGACAATGATCTTGGCAAACATGTTCTTGCCGTTGGAGAGTACCAACAATGGTCCTTCAGAGATAATTTTCTTGACTCGACTCTTTTTTGGTGCAAGATGGATGCAGGCAATGTGCATGCGCGTTTTGAAGTTTATCGTGCCAAAATTGAGGAGACGTTATGTGATTCCCTATGCAATCGAGCTCTAACAAACGATGGAGCCTATTTTTATGATCAGTTCCGTGGCTACTGGCAGAAGAGATTATCATGGTATATTCCATAA 417 0.4101 MLKSLVTIIVFLLIVRAQDDLGDDSVFDGKKTVRVLNAMNDGILVYLHCRSRDNDLGKHVLAVGEYQQWSFRDNFLDSTLFWCKMDAGNVHARFEVYRAKIEETLCDSLCNRALTNDGAYFYDQFRGYWQKRLSWYIP* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1201 138 Pfam Plant self-incompatibility protein S1 32 135 IPR010264 -
Gso1g1201 138 PANTHER PUMILIO HOMOLOG 15-LIKE 18 121 - -
Gso1g1201 138 PANTHER - 18 121 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1201 Gso-Chr1 47737919 47738335 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1201 8 113 Carbohydrate Esterase AT3G16970 26.364 1.52e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1201 - - gmx:102666050 291.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1201 1 47737919 47738335 Gso3g0204 3 2793319 2793982 GST