Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1200 ATGTTGAAGTCCCTGGTCACAATTACTATATTCTTGATGATTGTCTGTGCTCAAGATGGTCTGAGTGATAATACCATTTTTGACGGAAAGAAAACTGTGCGTGTCTATAATGGGATGAATGATGGCATTCTTGTGTATCTCCATTGTCGATCAAGGGACAATGATCTTGGCCAACATGTTCTTGCCGTTGGAGAGTATCAAGAATGGTCCTTCACAGATAACCTTTTTGGCACAACTCTTTTTTGGTGCACAATGGATGCAGGCAATGTGCATGCGAGTTTTGAAGTTTACAATGCCCAAACTGAGGAGATGAATTGTAGTACCCAATGCAATAGAATTCTAAATAACTATGGAGGCTATTTTTTTATTCAGTACTATCGCTACTGGGAGAAGAGATTGTCATGGCATATTCCAAAAACACCATCTTTTTAA 432 0.3889 MLKSLVTITIFLMIVCAQDGLSDNTIFDGKKTVRVYNGMNDGILVYLHCRSRDNDLGQHVLAVGEYQEWSFTDNLFGTTLFWCTMDAGNVHASFEVYNAQTEEMNCSTQCNRILNNYGGYFFIQYYRYWEKRLSWHIPKTPSF* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1200 143 PANTHER - 21 121 IPR010264 -
Gso1g1200 143 PANTHER PUMILIO HOMOLOG 15-LIKE 21 121 - -
Gso1g1200 143 Pfam Plant self-incompatibility protein S1 32 135 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1200 Gso-Chr1 47734095 47734526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1200 30 112 Carbohydrate Esterase AT3G16970 27.711 6.19e-07 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1200 - - gmx:106794334 308.531