Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1174 ATGGCACAACTCAACCTCATATTGGAAGTCATTTTCCTCTCTCTCCTCTTCTCAATTCTTGCCATCCCAGTTGAGCCAACATCATTGGCAAGGCACAAAAATCCCCAAACAATGACCTACATAGAATCCTCTTGCAGTGGCACCCTCTACCCAAATCTATGCATTCGTTGCTTGGCCCAATATGCAAAATCCACCATAAATGGCCCACAACACTTGGCCCAATATGCTTTGTCAGTTAGCCTCTCTAGAGCACTTCACACAAGAGAGTACCTTTTGAAAGTGGTCAAGGAAATTAAGGCTAAGGGTGTCAAGAACAACAAAAGGGAGTACCTAATTGTGCAAGATTGTGTGAACCAAATCAGTGATAGTGTGGACCAACTTAGCCAAGCTATCAAAGAACTAAGTAGGCTAAACCAACATCAACATGGCTCCACCATCAATGATAACATGTTGTGGCACATAAGCAATGTTGAGACATGGGTGAGCACTGCCTTAACAGATGCTAGTAGTTGTGTGTACTCATTTCCTGGTCATAGGATGAGTAAGAGAGCAGCTTCTATTAAAGTTAAAGCCATGAATGTGGCAGAAGTTACTAGTAATGCACTTGCCTTGTTTCTTAGATATGCATCTAGGTACAGAAAATAA 645 0.4202 MAQLNLILEVIFLSLLFSILAIPVEPTSLARHKNPQTMTYIESSCSGTLYPNLCIRCLAQYAKSTINGPQHLAQYALSVSLSRALHTREYLLKVVKEIKAKGVKNNKREYLIVQDCVNQISDSVDQLSQAIKELSRLNQHQHGSTINDNMLWHISNVETWVSTALTDASSCVYSFPGHRMSKRAASIKVKAMNVAEVTSNALALFLRYASRYRK* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1174 214 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 207 IPR035513 -
Gso1g1174 214 PANTHER PECTINESTERASE INHIBITOR-LIKE 2 210 - -
Gso1g1174 214 CDD PMEI-like_3 43 210 - -
Gso1g1174 214 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 205 IPR035513 -
Gso1g1174 214 TIGRFAM PME_inhib: pectinesterase inhibitor domain 12 205 IPR006501 GO:0004857
Gso1g1174 214 Pfam Plant invertase/pectin methylesterase inhibitor 40 204 IPR006501 GO:0004857
Gso1g1174 214 PANTHER BNAANNG18590D PROTEIN 2 210 - -
Gso1g1174 214 SMART PMEI_2 36 204 IPR006501 GO:0004857
Gso1g1174 214 Coils Coil 117 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1174 Gso-Chr1 47145077 47145931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1174 31 204 Carbohydrate Esterase AT3G14310 24.000 3.99e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1174 - - gmx:100785555 402.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1174 1 47145077 47145931 Gso3g0227 3 3111526 3112440 GST