Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1153 ATGAAGGCCATGCCCTTGCCTTTTGAGGAATTTCAAGGGAAGGGAGTGTTGGATTTCTCTTCTGCCTCAGATTTATTTTCAGTGCTTTTGCATCATCCACAACCAAAGTGGACCACAGACAAAGCGGACTATTGCTATGTGGGCAGCAGCACTGAGCCCACCTCAGTTCTTGACTCCAGAAGAAGCCCTAGCCCTCCCACTTCCTCCTCCACAATGTCCTCTTCTCTTGGCAGCAGCAGCAACAACAGCACCAGCAAGGGTGGTGGTGGTAGTGGCACTTCAGCCAACACCACCACCAACCCAACACCACCCTCAGGCAACAACAACAACAACCCTCCTCAGGAATCCAGCCCTGAGAAATGTGGCATCAGGATGGAGGACTGGGAGGGTCAAGATCAATCCATTCTGAGGCTCATCATGGGGGATGTTGAAGACCCTTCTGCTGGATTGAGCAAGCTCCTTCAAAGCACTGCCTGTGGCTCTCAAAGTGTTGATTTCAATGCTGGCTTTGGTGTTGTTGATCAACAAGGGTTGAATATGAATATGAATATGGTGAGTAGTGGTAATATTGACCAAAATTACCCTGCTGGTTTCCCTTTCATTGCTGAGAATATTGATGGCCAGAATGCCAAGGCTGGTTCTGGGACTGGCCAGGTTTCAGAATCTGTTGTTTTCTCTGGCAACAATCCCCTCATGGTGTCAACATCTGTGTCCCCTGGTGTGTTCACTTCTCAGCAGCAGCAGGAGTTTGGAGTGGTGGATGAGAAGCCTCAGGTTATTAATCCACAGTTTATGTTGAACCAGAACCAAGTTCAGTTCTCAGAGAATCCTTCTTTCTTTGTGCCATTGATGTACCCCCAGGTGCAGGTGCAGGAGCAACAGGTTTTCTCTCCTCCGCATCAATCGAAACGCCCTCTCTTTGACACGATTGGTCACAATTTTCAGGCTCCAAGGTTGCCCCTTTTGGATTCAGGGCAAGAGGTGTTTGGTAGGAGGCAGCAAACACAGCTGCCATTGTTTCCTCACCATATGCAACAACAACAACAACAACAATCAATGGGTTTGCCATCTGCTAAACAGCAGAAGGTGAGTTCCACCGGAGACGATGCAAGCCACCAGTTTCAACAGGCTATATTTGATCAGTTGTACAAAACTGCTGAGCTCATAGAAGCTGGTAATCCGGTTCATGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCCCCTATAGGTAAGCCTTTTCAGAGGGCTGCTTTCTACATGAAGGAGGCTTTGATGTCACTGCTTCATTCAAATGCTCACAGTTTCATGGCTTTTTCGCCAATTAGTTTCATATTCAAAATCGGAGCTTATAAGTCCTTTTCTGAGATATCACCTGTACTTCAGTTTGCCAATTTTACTTGCAACCAAGCCCTCATTGAAGCTGTGGAAAGGTTTGACCGAATTCATGTTATTGATTTTGATATTGGGTTTGGAGTACAGTGGTCATCTTTTATGCAAGAGCTTGCCTTGAGAAGTAGTGGGGCACCTTCACTCAAGGTCACTGCCATTGTGTCACCCTCCACTTGTGATGAGGTTGAGCTCAATTTCACTAGAGAGAATTTGATCCAATACGCCAAGGACATCAACGTGTCATTCGAGTTAAATGTTTTTAGTATTGAATCATTGAACTCTGCTTCATGTCCACTGCTTGGTCAATTCTTTGATAACGAGGCAATTGCTGTGAATATGCCGGTTTCAAGCTTCACAAACTATCCAGCGTTGTTCCCTTCTGTTCTTCATTTTGTGAAGCAGCTCAGGCCAAAGGTCGTGGTCACTTTGGACAGAATTTGTGATCGAATTGATGTACCACTTCCCACCAATGTAGTTCATGTTCTCCAATGTTATTCGGCCTTGCTCGAATCTCTGGATGCGGTGAATGTGAATCTTGATGCCCTCCAAAAGATTGAGAGGCATTTCATCCAACCAGCCATCAAGAAAATTATACTTGGCCACCACCATTCTCAAGAAAAATTACCCCCATGGAGGAACCTCTTCATACAATCTGGATTCTCTCCATTCACATTTAGCAACTTCACAGAAGCTCAAGCTGAGTGTCTAGTTCAGAGGGCACCTGTGAGGGGATTTCATGTGGAGAGAAAGCCTTCATCACTTGTTCTATGCTGGCAAAGGAAAGAACTCATCTCAGTTTCTACTTGGAGATGCTGA 2211 0.4604 MKAMPLPFEEFQGKGVLDFSSASDLFSVLLHHPQPKWTTDKADYCYVGSSTEPTSVLDSRRSPSPPTSSSTMSSSLGSSSNNSTSKGGGGSGTSANTTTNPTPPSGNNNNNPPQESSPEKCGIRMEDWEGQDQSILRLIMGDVEDPSAGLSKLLQSTACGSQSVDFNAGFGVVDQQGLNMNMNMVSSGNIDQNYPAGFPFIAENIDGQNAKAGSGTGQVSESVVFSGNNPLMVSTSVSPGVFTSQQQQEFGVVDEKPQVINPQFMLNQNQVQFSENPSFFVPLMYPQVQVQEQQVFSPPHQSKRPLFDTIGHNFQAPRLPLLDSGQEVFGRRQQTQLPLFPHHMQQQQQQQSMGLPSAKQQKVSSTGDDASHQFQQAIFDQLYKTAELIEAGNPVHAQGILARLNHQLSPIGKPFQRAAFYMKEALMSLLHSNAHSFMAFSPISFIFKIGAYKSFSEISPVLQFANFTCNQALIEAVERFDRIHVIDFDIGFGVQWSSFMQELALRSSGAPSLKVTAIVSPSTCDEVELNFTRENLIQYAKDINVSFELNVFSIESLNSASCPLLGQFFDNEAIAVNMPVSSFTNYPALFPSVLHFVKQLRPKVVVTLDRICDRIDVPLPTNVVHVLQCYSALLESLDAVNVNLDALQKIERHFIQPAIKKIILGHHHSQEKLPPWRNLFIQSGFSPFTFSNFTEAQAECLVQRAPVRGFHVERKPSSLVLCWQRKELISVSTWRC* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1153 736 MobiDBLite consensus disorder prediction 342 367 - -
Gso1g1153 736 Pfam GRAS domain family 380 735 IPR005202 -
Gso1g1153 736 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 7 735 IPR005202 -
Gso1g1153 736 MobiDBLite consensus disorder prediction 50 121 - -
Gso1g1153 736 ProSiteProfiles GRAS family profile. 369 735 IPR005202 -
Gso1g1153 736 MobiDBLite consensus disorder prediction 50 117 - -
Gso1g1153 736 PANTHER GRAS FAMILY TRANSCRIPTION REGULATOR 7 735 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1153 Gso-Chr1 46563393 46566564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1153 377 736 GRAS Transcription Factor Family AT4G00150 55.647 5.07e-130 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso1g1153 GRAS 9.4e-92 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1153 - - gmx:100801785 1335.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g2818 8 45906961 45911291 Gso1g1153 1 46563393 46566564 PCT