Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1146 ATGGAATTAGTTCTACATTTCCTAAACACCACAACAATTGGAGTTGTTTCTCTAATCTTCCTCTTGTGTTTGTTTTTGTATGGTCCCTTAAAAAAAGTTCACGGTAGCAGCAAAGAGGCTCCCACAGTTGGTGGTGCATGGCCAATATTTGGCCACCTCCCATTGTTGATTGGTTCTAAGTCACCTCATAAAGCCTTGGGTGCTTTGGCTGAGAAGCATGGACCCTTGTTCACCATCAAGCTCGGTGTCAAGAAGGCTTTGGTAGTTAGCGACTGGGAAATGGCTAGGGAATGCTTCACAACGAACGACGTTGCAGTTTCCGCTCGCCCCAAGCTTCTCGTCGCTGAGCTCATGTGCTACAACAACGCCATGTTGCTCGTGGCGCCCTACGGTCCCTATTGGCGCGAACTAAGGAAGATCATTGTGACGGAGATCCTCTCCTCGAGCCGTGTAGAGCAACTACAAGATGTTCGTGTGTCCGAAGTTCAAAATTCGATCGTAGAACTCTACGACGTTTGGCGTAGCCAAAAGAACGAGTCTGACTATGCATCCGTGGAGTTGAAGCAATGGTTTGCTCAGCCCATATTCAACATGGTTCTACGAATGGTCGTCGGGAAGCGGTTTCTGAGTGCCACGGCGACCGACGAGAAGGCAGAGAAGTGTGTAAAGGCTGTGGACGAGTTCATGCGTCTGGCGGGCGTGTTCACCGTCGGAGACGCTATTCCGTATTTGAGATGGCTTGATTTTGGTGGCTATGAGAAGGCCATGAAAGAAACTGCCAAGGAATTGGATGTGATGATAAGTGAGTGGTTAGAGGAGCATCGACAAAAGAGGGCTTTGGGTGAGGGCGTTGATGGAGCTCAAGACTTCATGAACGTGATGCTTTCCTCGCTTGATGGAAAAACTATTGACGGAATCGATGCAGATACCCTTATCAAATCTACTGTATTGACAATAATTCAAGCAGGAACTGAAGCAAGCATTACTACTATTATTTGGGCAATGTGTTTGATATTGAAAAATCCTCTTATACTAGAAAAAATAAAAGCAGAACTAGACATCCAAGTTGGAAAAGACAGATGCATATGTGAATCTGATATAAGTAACTTAGTATATCTTCAAGCTGTAGTCAAAGAAACTTTTAGATTGTATGCTCCAGGTCCCCTCTCATCACCTCGTGAATTCGCAGAGGATTGCACTTTAGGTGGCTACCATGTCAAAAAGGGAACTCGTCTAATTACAAACATTTGGAAGATTCACACGGATCCTAATGTTTGGTCAGATCCATTTGAGTTTAAACCAGACAGGTTTCTTACCACTCATAAAGATATTGACGTTAAGGGTCATCATTTTCAGCTATTACCATTTGGAAGTGGTAGAAGGGTTTGCCCTGGAATATCCTTTGGCCTTCAAACAGTTCATTTGGCACTTGCTAGTTTCTTGCATTCCTTTGAAATCTTAAATCCGTCAACTGAACCTCTTGATATGACTGAAGCCTTTGGAGTAACCAACACTAAAGCCACTCCACTTGAGGTTCTTGTTAAACCATGTTTATCTCCAAGTTGTTACAAAAGTATGTGA 1581 0.4409 MELVLHFLNTTTIGVVSLIFLLCLFLYGPLKKVHGSSKEAPTVGGAWPIFGHLPLLIGSKSPHKALGALAEKHGPLFTIKLGVKKALVVSDWEMARECFTTNDVAVSARPKLLVAELMCYNNAMLLVAPYGPYWRELRKIIVTEILSSSRVEQLQDVRVSEVQNSIVELYDVWRSQKNESDYASVELKQWFAQPIFNMVLRMVVGKRFLSATATDEKAEKCVKAVDEFMRLAGVFTVGDAIPYLRWLDFGGYEKAMKETAKELDVMISEWLEEHRQKRALGEGVDGAQDFMNVMLSSLDGKTIDGIDADTLIKSTVLTIIQAGTEASITTIIWAMCLILKNPLILEKIKAELDIQVGKDRCICESDISNLVYLQAVVKETFRLYAPGPLSSPREFAEDCTLGGYHVKKGTRLITNIWKIHTDPNVWSDPFEFKPDRFLTTHKDIDVKGHHFQLLPFGSGRRVCPGISFGLQTVHLALASFLHSFEILNPSTEPLDMTEAFGVTNTKATPLEVLVKPCLSPSCYKSM* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1146 526 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1146 526 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1146 526 PRINTS E-class P450 group I signature 194 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1146 526 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1146 526 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1146 526 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1146 526 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1146 526 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1146 526 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1146 526 SUPERFAMILY Cytochrome P450 46 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1146 526 Pfam Cytochrome P450 43 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1146 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Gso1g1146 526 PANTHER CYTOCHROME P450 82C3-RELATED 2 524 - -
Gso1g1146 526 PANTHER CYTOCHROME P450 82A2 2 524 - -
Gso1g1146 526 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1146 526 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1146 526 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g1146 526 Gene3D Cytochrome P450 31 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1146 Gso-Chr1 46213208 46217531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1146 40 516 Cytochrome P450 AT4G31940 46.914 7.18e-161 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1146 - - gmx:100778056 1045.42