Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1134 ATGAAGCAAGTGCAACTCATCCTACTCCTATCAGTGTCTCTTGTTCTTTTGGGTCCAATCCTAGTGATCTCAATAGACCTTTCTTCTTTCAACGATGATGTGTTGGGGTTGATTGTGTTCAAGGCTGGCCTAGAAGACCCAAAAGGAAAACTCTCTACGTGGAATGAAGATGATTATAGTCCTTGCAATTGGGTTGGTGTCAAATGTGACCTTGCAAACAATAGGGTATCTTCTCTTGTTCTTGATGGATTTTCTCTTTCTGGCCACATTGATAGGGGCCTTTTGAGACTGCAGTTTCTTCAGATTCTGTCTCTCTCAAGGAACAACTTCACAGGGACCATAGCTCCTGATCTTCTCAGCATTGGTGATTTACAAGTTGTTGATTTGAGTGAGAACAACCTCTATGGACCAATCCCTGATGGGATTTTCCAGCAATGTTGGTCTCTAAGAGTAGTTTCATTTGCCAACAACAACCTCACAGGTAAGATTCCTGATTCTTTGAGCTCATGCTATTCATTGGCAGTTGTGAACTTTTCCTCTAACCAGCTACATGGGGAATTGCCATCTGGAATGTGGTTTTTGAGGGGGCTACAGTCAATTGATCTTTCAAACAACTTTCTGGAGGGAGAGATTCCTGAAGGAATTCAGAATCTGATTGATTTGAGGGAGTTGAGGCTAGGGAGTAACCACTTCACTGGTAGGGTTCCTGAGCATATTGGAGACTGCTTGCTCTTGAAGTTGGTTGATTTCAGTGATAATTCTATTTCTGGGAGACTTCCTGAGTCAATGCAAAAACTCACCTCATGCACATTCCTTAGCTTGCAAGGAAATTCATTCACTGGTGGCATTCCACACTGGATTGGAGAAATGAAAAGTCTAGAGGTATTGGATCTTTCTGCAAACAGATTTTCTGGTTGGATTCCAAAGTCAATTGGAAATCTTGACTTGCTGAGTAGGTTGAATCTGTCAAGGAATCAGATCACAGGAAACCTGCCAGAGTTAATGGTAAACTGCATTAAGCTTTTGACTCTTGACATCAGCCACAATCACTTGGCAGGCCATCTTCCTTCATGGATATTCAGGATGGGCTTACAAAGTGTCTCTCTTTCAGGAAATAGGTTTAGTGAGAGCAATTATCCCTCACTTACTTCCATTCCTGTATCTTTTCATGGCCTCCAGGTTTTGGATTTGTCATCAAATGCATTTTTTGGCCAACTTCCATCTGGAATTGGAGGTCTTAGTAGCTTGCAAGTCTTGAATTTGTCCACCAATAATATCTCAGGGTCTATTCCTATGAGTATTGGAGAACTTAAATCATTGTACATTCTTGATTTGAGTGACAACAAGCTTAATGGAAGCATTCCTTCTGAAGTAGAAGGGGCAATTTCACTCAGTGAAATGAGGCTACAAAAGAACTTTTTAGGAGGGAGAATTCCAGCCCAAATTGAGAAGTGTTCAGAGCTAACATTTCTGAATCTTTCTCACAACAAGCTTATTGGTTCAATCCCTTCGGCCATTGCAAACCTAACCAATCTTCAGTATGCAGATTTCTCATGGAATGAACTCTCTGGAAGCTTACCAAAGGAGCTGACAAATCTTTCCAACCTTTTCTCATTTAATGTTTCATACAACCGCCTTCAAGGTGAGCTACCAGTGGGTGGTTTCTTCAATACAATCTCTCCTTTATCTGTCTCTGGTAATCCATTGTTATGTGGTTCAGTTGTTAATCACTCTTGCCCTTCTGTTCATCCAAAGCCTATTGTCCTAAACCCCAACTCTTCTTACTCCAACTCTGGCTCTTCCTTACAAAACAATCATCATAAGATGATGCTCAGCATCTCTGTCATTATTGCCATTGGTGCTGCTATTTTTATTGTCATTGGTGTGGTGGTTGTTACTGTCCTAAATATCCATGCAAGGTCTTCAATGTTATCTTCTGCTGCTCCATTTGTGTTCTCTGGTGGTGAGGACTATAGCGGTTCACCCGCGAATGATCCAAACTATGGCAAGCTTGTGATGTTTTCCGGCGATGCTGAATTTGTTGATGGTGCTCATAATATTCTTAACAAAGACAGTGAAATAGGCCGTGGAGGATTTGGAGTTGTTTATTGCACTGTCCTTAGAGATGGTCATTGTGTTGCAATCAAGAAGCTTACAGTGTCCACTTTGACCAAGTCTCAAGAAGACTTTGAGAGGGAAGTTAAAATGCTTGGGAAGATCAAGCATCAAAATCTTGTGGCACTTGAAGGTTATTATTGGACTCCATCCTTGCAGCTCCTAATTTATGAGTACCTAGCCAGAGGGAGTTTGCAAAAGCTTCTACACGATGATGATAGCAGCAAAAATTTGCTTTCTTGGAGACAAAGGTTCAAGATCATTCTTGGAATGGCAAAAGGGTTGGCCTATTTGCACCAAATGGAGTTAATTCACTATAATCTAAAATCAACCAATGTTTTCATAGATTGTTCTGATGAACCAAAGATAGGAGACTTTGGCTTGGTAAGGCTATTGCCAATGCTAGACCATTGTGTTTTGAGTAGCAAAATTCAAAGTGCACTTGGATACATGGCTCCTGAGTTCGCTTGCCGCACGGTCAAGATAACCGAGAAGTGTGACATTTATAGTTTTGGAATTTTGATTTTGGAGGTGGTGACAGGAAAAAGACCTGTGGAATACATGGAGGATGATGTGGTTGTTCTTTGTGACAAGGTGAGGAGTGCATTGGATGATGGCAAAGTGGAGCAATGTGTTGATGAGAAGCTTAAGGGTAATTTTGCTGCAGAGGAAGCAATTCCTGTGATAAAATTGGGGTTGGTTTGTGCATCACAAGTGCCCTCAAACCGTCCTGATATGGCTGAGGTAATCAACATATTAGAGCTGATCCAATGTCCTTCAGAGGAATTACAATGA 2910 0.4131 MKQVQLILLLSVSLVLLGPILVISIDLSSFNDDVLGLIVFKAGLEDPKGKLSTWNEDDYSPCNWVGVKCDLANNRVSSLVLDGFSLSGHIDRGLLRLQFLQILSLSRNNFTGTIAPDLLSIGDLQVVDLSENNLYGPIPDGIFQQCWSLRVVSFANNNLTGKIPDSLSSCYSLAVVNFSSNQLHGELPSGMWFLRGLQSIDLSNNFLEGEIPEGIQNLIDLRELRLGSNHFTGRVPEHIGDCLLLKLVDFSDNSISGRLPESMQKLTSCTFLSLQGNSFTGGIPHWIGEMKSLEVLDLSANRFSGWIPKSIGNLDLLSRLNLSRNQITGNLPELMVNCIKLLTLDISHNHLAGHLPSWIFRMGLQSVSLSGNRFSESNYPSLTSIPVSFHGLQVLDLSSNAFFGQLPSGIGGLSSLQVLNLSTNNISGSIPMSIGELKSLYILDLSDNKLNGSIPSEVEGAISLSEMRLQKNFLGGRIPAQIEKCSELTFLNLSHNKLIGSIPSAIANLTNLQYADFSWNELSGSLPKELTNLSNLFSFNVSYNRLQGELPVGGFFNTISPLSVSGNPLLCGSVVNHSCPSVHPKPIVLNPNSSYSNSGSSLQNNHHKMMLSISVIIAIGAAIFIVIGVVVVTVLNIHARSSMLSSAAPFVFSGGEDYSGSPANDPNYGKLVMFSGDAEFVDGAHNILNKDSEIGRGGFGVVYCTVLRDGHCVAIKKLTVSTLTKSQEDFEREVKMLGKIKHQNLVALEGYYWTPSLQLLIYEYLARGSLQKLLHDDDSSKNLLSWRQRFKIILGMAKGLAYLHQMELIHYNLKSTNVFIDCSDEPKIGDFGLVRLLPMLDHCVLSSKIQSALGYMAPEFACRTVKITEKCDIYSFGILILEVVTGKRPVEYMEDDVVVLCDKVRSALDDGKVEQCVDEKLKGNFAAEEAIPVIKLGLVCASQVPSNRPDMAEVINILELIQCPSEELQ* 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1134 969 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 962 - -
Gso1g1134 969 SUPERFAMILY L domain-like 48 379 - -
Gso1g1134 969 Gene3D Phosphorylase Kinase; domain 1 667 764 - -
Gso1g1134 969 Pfam Protein kinase domain 689 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso1g1134 969 ProSitePatterns Protein kinases ATP-binding region signature. 694 717 IPR017441 GO:0005524
Gso1g1134 969 Gene3D Transferase(Phosphotransferase) domain 1 765 964 - -
Gso1g1134 969 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Gso1g1134 969 Gene3D Ribonuclease Inhibitor 190 286 IPR032675 -
Gso1g1134 969 Gene3D Ribonuclease Inhibitor 31 189 IPR032675 -
Gso1g1134 969 CDD STKc_IRAK 694 961 - -
Gso1g1134 969 SUPERFAMILY L domain-like 364 572 - -
Gso1g1134 969 SMART LRR_typ_2 339 362 IPR003591 -
Gso1g1134 969 SMART LRR_typ_2 533 557 IPR003591 -
Gso1g1134 969 SMART LRR_typ_2 121 145 IPR003591 -
Gso1g1134 969 SMART LRR_typ_2 194 217 IPR003591 -
Gso1g1134 969 SMART LRR_typ_2 290 313 IPR003591 -
Gso1g1134 969 SMART LRR_typ_2 314 338 IPR003591 -
Gso1g1134 969 SMART LRR_typ_2 218 242 IPR003591 -
Gso1g1134 969 SMART LRR_typ_2 389 413 IPR003591 -
Gso1g1134 969 SMART LRR_typ_2 437 461 IPR003591 -
Gso1g1134 969 Pfam Leucine Rich Repeat 197 218 IPR001611 GO:0005515
Gso1g1134 969 SMART LRR_sd22_2 290 316 - -
Gso1g1134 969 SMART LRR_sd22_2 509 535 - -
Gso1g1134 969 SMART LRR_sd22_2 194 217 - -
Gso1g1134 969 SMART LRR_sd22_2 437 460 - -
Gso1g1134 969 ProSiteProfiles Protein kinase domain profile. 688 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso1g1134 969 Pfam Leucine rich repeat 391 450 IPR001611 GO:0005515
Gso1g1134 969 Pfam Leucine rich repeat 272 327 IPR001611 GO:0005515
Gso1g1134 969 SUPERFAMILY Protein kinase-like (PK-like) 689 962 IPR011009 -
Gso1g1134 969 Gene3D Ribonuclease Inhibitor 290 582 IPR032675 -
Gso1g1134 969 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 1 962 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1134 Gso-Chr1 45863573 45868117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1134 30 965 Receptor kinase-like Gene Family AT3G56370 59.724 0.0 1093
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Gso1g1134 Pkinase 1.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1134 - - gmx:100791204 1838.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1134 1 45863573 45868117 Gso3g0280 3 3963861 3968483 GST
Gso9g2267 9 46928447 46932760 Gso1g1134 1 45863573 45868117 PCT
Gso1g1134 1 45863573 45868117 Gso9g2267 9 46928447 46932760 PCT