Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1120 ATGTACAAGGGAAGATTAGGAGGCAAGGCTCAGCTTGGATATGTTGAAACTGACCCTTTGGGTCGATATGGACGTTTCAGGGACATTCTAGGCAAAGGAGCAGTGAAGGTAGTGTATAGGGCCTTTGATGAGGTCCTAGGAATAGAGGTGGCTTGGAACCAAGTCAAGCTTGGTGATGTGTTTCATTCACCAGATCTACTTCCGAGGCTTTATTCAGAGGTTCATCTCCTCAAGAACTTGGAACATGACTCCATCATGACCTTCCATGATTCTTGGATTGATGTCAACTGTAGAACCTTCAACTTCATCACCGAATTGTTCACATCTGGCACCCTACGAGAGTATAGAAAGAAGTACCAGCGAGTAGATATCAGAGCAGTGAAGAATTGGGCACGCCAGATTCTAAGTGGCTTGGAGTATTTGCACAGCCATGATCCTCCTGTGATACATAGAGACCTCAAATGTGACAATATCTTCATCAATGGCCATCTGGGGCAGGTCAAGATTGGTGACTTGGGCCTTGCAGCCATTCTCCGTGGCTCCCAACATGCACACAGTGTCATAGGTACACCAGAATTTATGGCACCTGAATTGTATGAAGAGGAATACAATGAGCTGGTCGACATATACTCCTTTGGGATGTGCATGATAGAAATTTTTACTTCTGAGTTCCCGTACAGCGAGTGCTCTAACCCTGCTCAGATATACAAGAAAGTTACTTCGGGGAAGCTACCAGAAGCCTATTACAGAATCCATGACTTGGAAGCCCAAAGATTTGTGGGAAAATGTTTGGCAAATGTCTCAGAGAGGTTGTCAGCAAAGGAGCTCTTGTTGGACCCATTTTTAGCCAAGGAACAACTAGACTCTCCACTTCCTAGCCCAACATTACCTAAAAAACAAGCCCCCACACTCAATTTCACTGCATCACTTGCCAAAGAGTTATCTCAGCCAAAGAGTAACCAAACAAAGGACTCACACATGACAATCACCGGATCAATAAATGAAGAGGATGACACGGTTTTCCTGAAAGTACAAATTTCTAACAAAGATGGGCAAAAGAGAAACATTTTCTTTCCATTTGACACCATATACGACACTGCCATTGATGTGGCAATGGAGATGGTTAAAGAACTGGAGATTAGTGACTTGGAACCATTGGAGATTGCTAAAATGATTGAGGAGGAGATATCAGCTTTGGTCCCTAAATGGAGGGATTGGGGCAGTGCTGAGTATCAAAAGCAGCATAGTTTTAGCTATGAAGAAGAGTATGACATGAGTAACCACCACCCTTTCTTCTCAACATCTTCTCGCTCTTCCTCTCATGCTTCTCTTCCAGTGTTTGGTTCTTCCTACAAGAATAATTCCCACTATCGTGGGAATCATTACCCTTTTGCTCAAGATTGGCCTCAAGATGAACTATTTATGAATGATGATGCGAGCTCTCAAAGCTCAATGAACTCCTTCAAGTGTTTCAATTTCAATTGCTGTGACCCTGGCAATGAAGATGAGCATGATCCAACTCTAGTACTAGGAGCAGAACACCTTTACTACACCCCAAAAGGAAACGAAAAGTGCATAAGATTTTGTCCTAGAGAAGAAGTGATGGATGCTGATTTCACCAAACAGTTATGCAACATGAGAATGGATTCTCACAGGTGTCATGGAATGCACAGGCTAACCAGGATCCGTTCCTTCGTGGACCTGAGGAGACAACAACTGCAACGATCACTGATGGAGGAGATTCACAAGAGGAGAATGTTCAAGACGGTTGGTGCCGTTGAGAACATTGGGTTTCAGAATCCAGAAGGAGGCGGATGTTTTTCTTATTGA 1830 0.4366 MYKGRLGGKAQLGYVETDPLGRYGRFRDILGKGAVKVVYRAFDEVLGIEVAWNQVKLGDVFHSPDLLPRLYSEVHLLKNLEHDSIMTFHDSWIDVNCRTFNFITELFTSGTLREYRKKYQRVDIRAVKNWARQILSGLEYLHSHDPPVIHRDLKCDNIFINGHLGQVKIGDLGLAAILRGSQHAHSVIGTPEFMAPELYEEEYNELVDIYSFGMCMIEIFTSEFPYSECSNPAQIYKKVTSGKLPEAYYRIHDLEAQRFVGKCLANVSERLSAKELLLDPFLAKEQLDSPLPSPTLPKKQAPTLNFTASLAKELSQPKSNQTKDSHMTITGSINEEDDTVFLKVQISNKDGQKRNIFFPFDTIYDTAIDVAMEMVKELEISDLEPLEIAKMIEEEISALVPKWRDWGSAEYQKQHSFSYEEEYDMSNHHPFFSTSSRSSSHASLPVFGSSYKNNSHYRGNHYPFAQDWPQDELFMNDDASSQSSMNSFKCFNFNCCDPGNEDEHDPTLVLGAEHLYYTPKGNEKCIRFCPREEVMDADFTKQLCNMRMDSHRCHGMHRLTRIRSFVDLRRQQLQRSLMEEIHKRRMFKTVGAVENIGFQNPEGGGCFSY* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1120 609 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 602 - -
Gso1g1120 609 Gene3D Phosphorylase Kinase; domain 1 9 105 - -
Gso1g1120 609 ProSiteProfiles Protein kinase domain profile. 24 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso1g1120 609 CDD STKc_WNK 22 282 - -
Gso1g1120 609 Gene3D Transferase(Phosphotransferase) domain 1 107 288 - -
Gso1g1120 609 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Gso1g1120 609 Pfam Protein kinase domain 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso1g1120 609 SMART serkin_6 24 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso1g1120 609 SUPERFAMILY Protein kinase-like (PK-like) 26 283 IPR011009 -
Gso1g1120 609 PANTHER WNK KINASE 1 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1120 Gso-Chr1 45403606 45410734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1120 12 424 MAP Kinase Kinase Kinase AT3G51630 67.633 0.0 577
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Gso1g1120 Pkinase 5.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1120 K08867 - gmx:100816187 1237.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1120 1 45403606 45410734 Gso3g0312 3 4664590 4670893 GST
Gso9g2281 9 47039878 47044808 Gso1g1120 1 45403606 45410734 PCT
Gso1g1120 1 45403606 45410734 Gso9g2281 9 47039878 47044808 PCT