Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1086 ATGCTTAGTATGATACATTATCAGGACTTCACTGGAAAAAAGGACATGATTTTTTGTGGGGTGTTTGATGGTCATGGTCCTCTAGGACACAAGTTATCACAGTGCATACGTGACAATCTACCCGCAAAACTGTCAGCATCAATCAAACAGTCACAAGAAAAAGCCATGAAACACTATGACGCTAATGCTACAAATGGTGGCAGTCATAGTGATGACTATGTTGAGGATAACCAAAATATGTCCTTTCCTTCATGGGAGGGAACCTTTATGAGGTGCTTCAGTGAAATAGATGAAAAGTTTGCTAAGAACATAGACACTGACGGATTTCGGGGCGGTAGCACTGCTGTAACTGTAATCAAACAGGGTGACCAATTAATAATTGGCAATGTGGGGGATTCTCGTGCAGTTCTTTGCAGAAGAGCACCTGACAATCGTCTTATTCCTGTTCAACTTACTGTTGACTTGACTCCAGATATTCCAAGAGAAGCTTTGAGGATCATTAATTGTGGAGGTAGAATTTTTGCTACAGAAGAAGATCCAAGTGTAAACAGAGTATGGATGCCTAAAGGGGACTGCCCTGGACTGGCTATGGCAAGAGCCTTTGGAAATTTTTGCTTAAAAGACTATGGTGTCACCTCGATCCCAGATGTATCATACAGAAAACTTACCAAGCAGGATGAGTTTGTGGTTTTGGCTTCTGATGGGATATGGGATATGCTATCAAACAGTGAAGTAATAAACATAGTTGCTTCAGCACCAAAAAGGTCCATGGCAGCCAAATTGTTAGTAAACCATGCTGTTCGGGCTTGGAGATATAAGCATGGTTTCAAGGTTGATGATTGTTCAGCCATATGCTTGTTCCTGAAGGATTAG 873 0.4147 MLSMIHYQDFTGKKDMIFCGVFDGHGPLGHKLSQCIRDNLPAKLSASIKQSQEKAMKHYDANATNGGSHSDDYVEDNQNMSFPSWEGTFMRCFSEIDEKFAKNIDTDGFRGGSTAVTVIKQGDQLIIGNVGDSRAVLCRRAPDNRLIPVQLTVDLTPDIPREALRIINCGGRIFATEEDPSVNRVWMPKGDCPGLAMARAFGNFCLKDYGVTSIPDVSYRKLTKQDEFVVLASDGIWDMLSNSEVINIVASAPKRSMAAKLLVNHAVRAWRYKHGFKVDDCSAICLFLKD* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1086 290 Gene3D - 4 290 IPR036457 -
Gso1g1086 290 SUPERFAMILY PP2C-like 10 289 IPR036457 -
Gso1g1086 290 SMART PP2C_4 1 286 IPR001932 -
Gso1g1086 290 CDD PP2Cc 15 288 IPR001932 -
Gso1g1086 290 ProSiteProfiles PPM-type phosphatase domain profile. 1 288 IPR001932 -
Gso1g1086 290 Pfam Protein phosphatase 2C 13 268 IPR001932 -
Gso1g1086 290 PANTHER PROTEIN PHOSPHATASE 2C 65-RELATED 3 290 - -
Gso1g1086 290 PANTHER ALPHABET, ISOFORM E-RELATED 3 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1086 Gso-Chr1 44428513 44431226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1086 3 290 PP2C-type Phosphatase Gene Family AT1G79630 45.000 9.45e-97 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1086 - - gsj:114416615 598.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1680 18 48906085 48910053 Gso1g1086 1 44428513 44431226 PCT
Gso9g2317 9 47439740 47443792 Gso1g1086 1 44428513 44431226 PCT
Gso1g1086 1 44428513 44431226 Gso18g1680 18 48906085 48910053 PCT
Gso1g1086 1 44428513 44431226 Gso9g2317 9 47439740 47443792 PCT