Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1067 ATGGCAAATTCATCTTCCGGAGCTTCTCAAATGAAATTTGTTCTTGTTCTTTTTCTCCTGTTTATTTCCGGATTGATGGATGTAGCATCAGAGCAAATGCCAGCAGATAGCGTTCCTCAGATAAAGTATGATGTCTTTGTAAACTTTAGGGGCGAGGACATCCGTCACAGTTTTCTTGGTTATTTGACTGAGGCTTTTTATCAAAAGCAAATAAATGCCTTTGTAGATGATAAACTTGAGAAGGGAGATGAAATATGGCCTTCACTTGTTGGAGCAATTCAGGGATCATCGATTTCATTGACCATATTCTCCGAAAACTATACTTCTTCACGTTGGTGTTTGGATGAACTTGTGAAAATACTTGAGTGTAGGGAGAAATACGGACAAATTGTAATACCTGTTTTCTACGGTGTAAATCCCACAGATGTACGGCATCAGAAGGGGAGTTATGGAGAAGCTCTTGCTCAACTTGGAAAGAAATATAATTTGACCACCGTGCAAAACTGGAGAAATGCTTTAAAGAAGGTTGCTGATTTATCAGGGATAAAATCATTTGATTACAAGACTGAAGTTGAACTGCTTGGAGAAATCATCAACATTGTCAATCTTGTGTTGACGAGTTTGGATAAGTTTGATCCTGAATCAAGTAGACTTATAGGAATTGACAAACAAATTCAACATTTAGAATCACTGTTACATCAAGAATCAAAATACGTCCGTGTTATTGGAATTTGGGGTATGGGCGGTATTGGAAAGACAACAATTGCGGAAGAAATATTTAGCAAACTACGCTCCGAATATGATGGTTATTATTTTCTGGCAAATGTAAAGGAAGAATCAAGCAGACAAGGAACAATTTATTTGAAGAGAAAACTATTTTCTGCAATACTTGGAGAAGATGTGGAAATGGATCATATGCCTAGATTGTCAAATTATATTAAGAGAAAGATTGGTCGTATGAAGGTTTTAATTGTGCTTGATGATGTGAATGATTCAAATTTACCAGAAAAATTATTTGAAAACCATGATTGGTTTGGACGAGGTAGTAGAATTATTATTACAACCAGAGATAAACAAGTGCTTATCGCTAATAAAGTTGATGATATATACCAAGTTGGGGCCTTGAACAACAGTGAAGCACTTGAGCTTTTTAGTTTGTATGCCTTTAATCAAAATCATTTTGATATGGAGTATTATAAGCTTTCAGAGATGGTGGTCAATTATGCCAAAGGCATCCCATTGGTTCTTAAAGTTTTGGGTCGTCTTCTTTGTGGGAAAGATAAGGAAGTATGGGAAAGTCAGCTACACAAACTTGAAAACATGCCAAATACAGATATTTACCATGCAATGAGATTGAGTTTTGATGATCTAGATCGCAAAGAACAGAAGATTCTTTTAGATCTTGCATGTTTCTTCATAGGATTGAATTTGAAACTGGACAGCATAAAAGTTTTATTGAAAGACAATGAAAGAGATGATTCAGTGGTTGCTGGGTTAGAAAGGTTGAAAGATAAAGCTCTTGTAACCATTTCTGAAGATAATGTTATATCTATGCACGATATCATACAAGAAATGGCTTGGGAGATTGTGCGCCAAGAATCAATTGAGGATCCTGGAAACCGTAGCCGATTGATCGATCCTAATGACGTTTATGAAGTATTAAAATATAACAAGGGGACTGAGGCCATAAGAAGCATAAGAGCAAACTTGCCAGCAATTCAGAATCTGCAGTTAAGCCCTCACGTGTTTAACAAGATGAGCAAACTACAGTTTGTCTATTTTAGAAAAAATTTTGATGTATTTCCTCTTCTTCCTCGTGGGCTTCAATCTTTCCCAGCTGAGCTAAGATATCTTTCTTGGTCGCATTACCCTCTGATATCTTTGCCAGAGAATTTTTCTGCCGAAAACCTTGTTATATTTGACTTGTCAGGTAGCCTAGTGTTAAAATTATGGGATGGAGTGCAGAACTTGATGAATTTGAAAGTACTTACAGTCGCGGGTTGTTTAAACTTGAAGGAGCTTCCAGACCTTTCGAAAGCCACAAATCTTGAATTTCTGGAGATCAGCTCTTGTTCTCAGTTGCTTAGTATGAATCCATCTATTTTGTCTCTCAAGAAGCTCGAGAGATTGTCTGCTCATCACTGTTCCCTTAACACGCTCATAAGCGATAATCATTTAACCTCCCTTAAATATCTCAACCTTCGAGGGTGCAAGGCACTAAGCCAATTTTCAGTGACATCAGAGAATATGATTGAACTAGATTTATCATTCACCAGTGTCAGTGCATTTCCCTCAACTTTTGGACGTCAAAGCAATCTCAAAATCCTAAGTCTTGTCTTCAATAACATTGAGAGCTTGCCTTCAAGCTTCAGGAATCTTACAAGATTGCGATATCTGAGTGTAGAAAGTTCCAGGAAGCTTCATACTCTGTCTCTAACAGAGCTTCCCGCATCCCTTGAAGTTCTTGATGCTACAGATTGCAAATCATTGAAGACTGTATACTTCCCATCAATTGCTGAACAATTCAAGGAAAATAGGAGAGAGATTCTCTTTTGGAATTGCTTGGAATTGGATGAACATTCTCTCAAGGCTATTGGCTTCAATGCACGTATTAACGTCATGAAATCTGCGTACCATAATTTATCTGCAACAGGTGAAAAAAATGTTGATTTCTATCTCAGATATAGTAGATCTTATCAAGTAAAGTATGTATATCCAGGAAGCAGCATTCCAGAGTGGTTGGAGTATAAGACAACAAAGGATTATTTAATTATTGATCTTTCTTCTACTCCACACTCCACTCTGTTGGGCTTTGTTTTCAGCTTTGTTATTGCTGAGTCTAAGGATCACAACAGAGCAGTATTTCTTGACTATCCATTTTATATCACTGTCAGTGAAGGCGAGGGTGAAAGTGAAAAGGGTGGTATTGACATCTTTGTGTCTCACACAGTTAGGGTTGAATCCGGTGTGTGTGTGATGTATGACCAGGAATGTTCTCACTACCTACACAGTAGAGCCAAAAATCAGACACGGCTTAAAATAAAGGTTACAACAAAGGAAGTGGCTCCAAGCGATTCAAAACGGGGTCTGGAGTTAAAAGGGTTTGGGGTCACCCCAATAACTTACTCAGTATATCAGAATTTCATTCAAGAAATAAACAGCTCGGCTGATCATAGTTTCAATCAACAAGTGAACACCTCAGCTGATCACAGTTTCATTCAACAAACAAATTCCCCAGCAAATCACAGTTTCATTCAGCAAACAAATTCCTCAGCAAATCACAGTTTCATTCAGCAAATAAACACCTCAGCAGATCACAGTTTCATTCAACAAGTAAATTTCTCCGCAGACCACATTTTCATTCAACAGATGGAAGTGCCCAGCTCTATGCTTTTCACTCAAATACTTGCTATCATCATCATCTTGCTTATACCCTTCTGGTTTCTGGTTGTTAAGAGGCGCAGACTTTAA 3471 0.3765 MANSSSGASQMKFVLVLFLLFISGLMDVASEQMPADSVPQIKYDVFVNFRGEDIRHSFLGYLTEAFYQKQINAFVDDKLEKGDEIWPSLVGAIQGSSISLTIFSENYTSSRWCLDELVKILECREKYGQIVIPVFYGVNPTDVRHQKGSYGEALAQLGKKYNLTTVQNWRNALKKVADLSGIKSFDYKTEVELLGEIINIVNLVLTSLDKFDPESSRLIGIDKQIQHLESLLHQESKYVRVIGIWGMGGIGKTTIAEEIFSKLRSEYDGYYFLANVKEESSRQGTIYLKRKLFSAILGEDVEMDHMPRLSNYIKRKIGRMKVLIVLDDVNDSNLPEKLFENHDWFGRGSRIIITTRDKQVLIANKVDDIYQVGALNNSEALELFSLYAFNQNHFDMEYYKLSEMVVNYAKGIPLVLKVLGRLLCGKDKEVWESQLHKLENMPNTDIYHAMRLSFDDLDRKEQKILLDLACFFIGLNLKLDSIKVLLKDNERDDSVVAGLERLKDKALVTISEDNVISMHDIIQEMAWEIVRQESIEDPGNRSRLIDPNDVYEVLKYNKGTEAIRSIRANLPAIQNLQLSPHVFNKMSKLQFVYFRKNFDVFPLLPRGLQSFPAELRYLSWSHYPLISLPENFSAENLVIFDLSGSLVLKLWDGVQNLMNLKVLTVAGCLNLKELPDLSKATNLEFLEISSCSQLLSMNPSILSLKKLERLSAHHCSLNTLISDNHLTSLKYLNLRGCKALSQFSVTSENMIELDLSFTSVSAFPSTFGRQSNLKILSLVFNNIESLPSSFRNLTRLRYLSVESSRKLHTLSLTELPASLEVLDATDCKSLKTVYFPSIAEQFKENRREILFWNCLELDEHSLKAIGFNARINVMKSAYHNLSATGEKNVDFYLRYSRSYQVKYVYPGSSIPEWLEYKTTKDYLIIDLSSTPHSTLLGFVFSFVIAESKDHNRAVFLDYPFYITVSEGEGESEKGGIDIFVSHTVRVESGVCVMYDQECSHYLHSRAKNQTRLKIKVTTKEVAPSDSKRGLELKGFGVTPITYSVYQNFIQEINSSADHSFNQQVNTSADHSFIQQTNSPANHSFIQQTNSSANHSFIQQINTSADHSFIQQVNFSADHIFIQQMEVPSSMLFTQILAIIIILLIPFWFLVVKRRRL* 1157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1067 1156 Gene3D - 40 208 IPR035897 -
Gso1g1067 1156 Pfam TIR domain 42 198 IPR000157 GO:0007165
Gso1g1067 1156 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 40 895 IPR044974 GO:0006952
Gso1g1067 1156 Gene3D Ribonuclease Inhibitor 550 742 IPR032675 -
Gso1g1067 1156 Pfam NB-ARC domain 228 442 IPR002182 GO:0043531
Gso1g1067 1156 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 40 895 - -
Gso1g1067 1156 PRINTS Disease resistance protein signature 241 256 - -
Gso1g1067 1156 PRINTS Disease resistance protein signature 316 330 - -
Gso1g1067 1156 PRINTS Disease resistance protein signature 409 423 - -
Gso1g1067 1156 PRINTS Disease resistance protein signature 724 740 - -
Gso1g1067 1156 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 213 468 IPR027417 -
Gso1g1067 1156 ProSiteProfiles TIR domain profile. 41 205 IPR000157 GO:0007165
Gso1g1067 1156 Gene3D - 374 458 IPR042197 -
Gso1g1067 1156 SUPERFAMILY Toll/Interleukin receptor TIR domain 37 181 IPR035897 -
Gso1g1067 1156 ProSiteProfiles Leucine-rich repeat profile. 772 793 IPR001611 GO:0005515
Gso1g1067 1156 SMART till_3 42 179 IPR000157 GO:0007165
Gso1g1067 1156 Gene3D Ribonuclease Inhibitor 743 835 IPR032675 -
Gso1g1067 1156 SUPERFAMILY L domain-like 569 854 - -
Gso1g1067 1156 Gene3D - 209 369 IPR027417 -
Gso1g1067 1156 SUPERFAMILY "Winged helix" DNA-binding domain 445 555 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1067 Gso-Chr1 43882150 43892025 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1067 43 826 WRKY Transcription Factor Family AT4G12020 32.765 2.29e-91 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1067 - - gmx:100797163 2259.57