Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso1g1065 | ATGGCACATACTTCCTCGGGAGCTTCTGAAATAAAATATGTTCTTTCTCTTTGTCTCCTGCTTACTTCGGGATTGATGGTTGCTGCATCAAAGCAAATGTTAGATAATGTTCCTCAAATGAAGTATGATGTTTTTGTTAACTTCAGGGGCAAGGACATCCGTGACGGTTTTCTCGGTTATTTGACTCGGGCTTTTCATCAAAAGCAAATATATGCTTTCATAGATGATAAACTTGAGAAGGGAGATGAAATATGGCCATCACTTGTTGGAGCAATTCAGGGATCATCGATTTCATTGACCATATTCTCCGAAAACTATACTTCTTCACGTTGGTGTTTGGAAGAACTTGTGAAAATACTTGAGTGCAGGGAGAAATACAGACAAACTGTAATACCTGTTTTCTACGGGGTAAATCCCACAGATGTGCGGCATCAGAAGGGGAATTATGGAGAAGCTCTTGCTGTACTTGGAAAGAAATATAATTTGACCACCGTGCAAAACTGGAGAAATGCTTTAAAGAAGGCTGCTGATTTATCAGGAATAAAGTCATTCGATTACAAGACTGAAGTTGATCTGCTTGGAGAAATCATCAACACTGTCAATCTTGTGTTGATAAGTTTGGATACGCATCCATTTAACATAAAAGGACATATAGGAATCGAAAAATCAATTCAACATTTAGAGTCATTGTTACACCAAGAGTCAAAATATGTCCGAGTTATTGGAATTTGGGGTATGGGCGGAATTGGAAAGACAACAATTGCAGAAGAAATGTTTAAAAAGCTATATTCCGAATATGATTCTTATTACTTTTTGGAAAATGAAGAGGAAGAATCAAGAAAGCATGGAACAATTTCGTTGAAGGAAAAACTTTTTTCTGCACTACTCGGAGAAAATGTGAAAATGAACATATTGCACGGGTTGTCAAATTATGTTAAGAGAAAGATAGGTTTTATGAAGGTTTTAATCGTTCTTGATGATGTGAATGATTCAGATTTACTAGAAAAATTAATTGGAAACCTTGATTGGTTTGGCCGAGGTAGTAGAATCATTATAACAACTAGAGATAAACAAGTGCTTATTGCAAATAAAGTTGATGATATATACCACGTTGGGGCATTGAATTCTAGTGAAGCACTGGAGCTTTTTAGTTTTTATGCCTTTAACCAAAATCATCTTGATATGGAGTATTATAAGCTATCAAAGAGAGTGGTCAATTATTCCCAAGGCATTCCATTAGTTCTTAAAGTTTTGGGTCATCTTCTTTGTGGGAAAGATAAGGAAGTATGGGAAAGTCAGCTAGACAAACTTAAAAACATGCCAAATACAGATATTTACAATGCAATGAGATTGAGTTATGATGATCTAGATCGTAAAGAACAAAAGATTCTTTTAGATCTTGCATGTTTTTTCATGGGATTGAATTTGAAAGTAGACCACATAAAAGTTCTATTGAAAGATAGCGAAAAAGATGATTCAGTGGTTGTTGGGTTAGAAAGATTGAAAGATAAGGCTCTTATAACCATTTCTGAAGATAATATTATATCTATGCACGACATCATACAAGAAATGGCTTGGGAGATTGTTCGTCAAGAATCAATTGAAGACCCAGGAAATCGAAGCCGATTGATGGATCCTAATGACATTTATGAAGTATTAAAATATAACAAGGGGACTGAAGCCATAAGAAGCATAAGGGCAGACATGTCAGTAATTAGGAAGCTGCAGTTAAGCCCTCACATATTTACTAAGATGAGCAAACTGCAGTTTTTGTATTTTCCTAGCAAATATAATCAAGATGGCCTTTCTCTCCTTCCTCACGGGCTTCAATCTTTCCCAGTTGAGCTAAGATATGTTGCTTGGATGCACTACCCTCTAAAGTCCTTGCCTAAGAACTTTTCTGCCAAAAACATTGTTATGTTTGACTTGTCTTGTAGCCAAGTGGAAAAACTTTGGGATGGAGTGCAGAATTTGATGAATTTAAAAGAACTTAAAGTCTCCGGTTCTGAAAACTTGAAGGAGCTGCCAGACCTTTCAAAAGCGACAAATCTTGAAGTGCTGGATATCAATATATGTCCTAGGTTGACTAGTGTGTCTCCATCTATTTTGTCTCTCAAGAGATTGTCTATAGCTTATTGTTCCCTTACAAAAATTACAAGCAAGAACCACCTACCCTCCCTTAGTTTTCTCAACCTTGAATCATGCAAAAAACTAAGGGAATTTTCAGTGACATCAGAGAATATGATTGAACTTGATTTATCATCCACTCGTGTCAATTCATTGCCTTCATCTTTTGGACGTCAAAGCAAGCTCAAAATCCTACGGCTAAGAGACAGTGGCATCAATAGTTTGCCTTCAAGCTTCAAGAATCTTACAAGACTGCAATATCTGACTGTATATAAATCCAGGGAGCTTTGTACTCTAACAGAGCTTCCCCTATCCCTTAAAACTCTAGATGCCACAGATTGCACATCATTGAAGACTGTATTGTTTCCATCAATTGCTCAGCAATTCAAGGAAAACAGGAAGGAAGTTCTGTTTTGGAATTGCTTGAAATTGGATGAACATTCTCTCAAGGCTATTGGGTTAAATGCACATATTAACGTGATGAGATTTGCATACCAACATTTATCTGCACCAGATGAAAATTATGATGATTACGATCGTACTTATGAATCTTATCAGGTAAAGTATGTGTATCCAGGAGGCATAGTTCCAGAGTGGATGGAGTATAAAACAACAAAGGATTATATAATTATTGATCTCTCTTCTAGTCCACACTCCTCACAATTGGGCTTCATTTTCAGCTTTGTTATCTCTGGTCCTATGGTGAAGGCAATAATGGGTTACAGATTTACATTTTATATCACTGTCAGTGATGATGAGGACGAAAATAAAAAGGATAGTATCGACATCTACATGTCTGACTCAATTGTCTGGGTTGCATCAGATCATGTGTGTGTGATTTATGACCAACGATGTTCTCGCTACCTAAACAGTAGAGTCAAAAATCAAACAAGGTTTAAAATCAAGGTTGAAGCAATGGCAGCAGCGGTGGCTCATCAGAGGGGCGTGGGGTTAAAAGGGTTTGGAGTCAGCCCAATAAACACCTCAGCATATCACAATTTCAGGAAACACATAAACACCACAGCATATCACAATTTCATTCAGGAAATGAACATCCCAGCAGATCACAGTTTCATTCAGAAAATAAAAGCCACAGCAGATCATAGTTTGATTCAACAAATGGAAGTGCCTGATCCTTTGTATTTCATTCCAATGCTTCCTATCTTCCTCTTTATATCCTTCTTTTTGTTAAGAGGCAGACTTTGCTTTAGACATAAGTTCTTTTATGTAAATTCTTGTTATACTGCAGGCCTGCTGAGTGATTATACAAACAGCAATAAGCTTCATTGA | 3417 | 0.3679 | MAHTSSGASEIKYVLSLCLLLTSGLMVAASKQMLDNVPQMKYDVFVNFRGKDIRDGFLGYLTRAFHQKQIYAFIDDKLEKGDEIWPSLVGAIQGSSISLTIFSENYTSSRWCLEELVKILECREKYRQTVIPVFYGVNPTDVRHQKGNYGEALAVLGKKYNLTTVQNWRNALKKAADLSGIKSFDYKTEVDLLGEIINTVNLVLISLDTHPFNIKGHIGIEKSIQHLESLLHQESKYVRVIGIWGMGGIGKTTIAEEMFKKLYSEYDSYYFLENEEEESRKHGTISLKEKLFSALLGENVKMNILHGLSNYVKRKIGFMKVLIVLDDVNDSDLLEKLIGNLDWFGRGSRIIITTRDKQVLIANKVDDIYHVGALNSSEALELFSFYAFNQNHLDMEYYKLSKRVVNYSQGIPLVLKVLGHLLCGKDKEVWESQLDKLKNMPNTDIYNAMRLSYDDLDRKEQKILLDLACFFMGLNLKVDHIKVLLKDSEKDDSVVVGLERLKDKALITISEDNIISMHDIIQEMAWEIVRQESIEDPGNRSRLMDPNDIYEVLKYNKGTEAIRSIRADMSVIRKLQLSPHIFTKMSKLQFLYFPSKYNQDGLSLLPHGLQSFPVELRYVAWMHYPLKSLPKNFSAKNIVMFDLSCSQVEKLWDGVQNLMNLKELKVSGSENLKELPDLSKATNLEVLDINICPRLTSVSPSILSLKRLSIAYCSLTKITSKNHLPSLSFLNLESCKKLREFSVTSENMIELDLSSTRVNSLPSSFGRQSKLKILRLRDSGINSLPSSFKNLTRLQYLTVYKSRELCTLTELPLSLKTLDATDCTSLKTVLFPSIAQQFKENRKEVLFWNCLKLDEHSLKAIGLNAHINVMRFAYQHLSAPDENYDDYDRTYESYQVKYVYPGGIVPEWMEYKTTKDYIIIDLSSSPHSSQLGFIFSFVISGPMVKAIMGYRFTFYITVSDDEDENKKDSIDIYMSDSIVWVASDHVCVIYDQRCSRYLNSRVKNQTRFKIKVEAMAAAVAHQRGVGLKGFGVSPINTSAYHNFRKHINTTAYHNFIQEMNIPADHSFIQKIKATADHSLIQQMEVPDPLYFIPMLPIFLFISFFLLRGRLCFRHKFFYVNSCYTAGLLSDYTNSNKLH* | 1139 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso1g1065 | 1138 | Pfam | TIR domain | 41 | 188 | IPR000157 | GO:0007165 | |
Gso1g1065 | 1138 | Gene3D | Ribonuclease Inhibitor | 747 | 899 | IPR032675 | - | |
Gso1g1065 | 1138 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 39 | 884 | IPR044974 | GO:0006952 | |
Gso1g1065 | 1138 | ProSiteProfiles | TIR domain profile. | 40 | 204 | IPR000157 | GO:0007165 | |
Gso1g1065 | 1138 | Gene3D | Ribonuclease Inhibitor | 550 | 746 | IPR032675 | - | |
Gso1g1065 | 1138 | Pfam | NB-ARC domain | 223 | 443 | IPR002182 | GO:0043531 | |
Gso1g1065 | 1138 | Gene3D | - | 39 | 205 | IPR035897 | - | |
Gso1g1065 | 1138 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 209 | 467 | IPR027417 | - | |
Gso1g1065 | 1138 | SMART | till_3 | 41 | 178 | IPR000157 | GO:0007165 | |
Gso1g1065 | 1138 | PRINTS | Disease resistance protein signature | 240 | 255 | - | - | |
Gso1g1065 | 1138 | PRINTS | Disease resistance protein signature | 315 | 329 | - | - | |
Gso1g1065 | 1138 | PRINTS | Disease resistance protein signature | 408 | 422 | - | - | |
Gso1g1065 | 1138 | PRINTS | Disease resistance protein signature | 722 | 738 | - | - | |
Gso1g1065 | 1138 | PANTHER | RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED | 39 | 884 | - | - | |
Gso1g1065 | 1138 | Gene3D | - | 206 | 368 | IPR027417 | - | |
Gso1g1065 | 1138 | Gene3D | - | 373 | 457 | IPR042197 | - | |
Gso1g1065 | 1138 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 39 | 180 | IPR035897 | - | |
Gso1g1065 | 1138 | SUPERFAMILY | L domain-like | 567 | 853 | - | - | |
Gso1g1065 | 1138 | SUPERFAMILY | "Winged helix" DNA-binding domain | 444 | 554 | IPR036390 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso1g1065 | Gso-Chr1 | 43803012 | 43808021 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso1g1065 | 42 | 839 | WRKY Transcription Factor Family | AT4G12020 | 33.496 | 1.50e-93 | 328 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso1g1065 | - | - | gmx:100796110 | 2115.12 |