Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1064 ATGACACTTTCTTCGTTCCTGTGTCTTGTTTTCATATTTCAATTTCTCTTCACATCACCCTCACTCTCTTTGTCGTCGGATGGGCTCGCCCTTCTCGCGCTAAAGTCTGCGGTGGACGAGCCCTCCGCTGCGGCGTTCTCCGACTGGAACAACGGCGACCCCACGCCGTGCGGCTGGTCAGGGATCGCCTGCACCAACATCTCCGGCGAGGCGGAGCCGCGCGTGGTCGGAATCTCCCTCGCCGGAAAATCGCTCTCCGGCTACCTCCCCTCGGAGCTCGGTACGCTACGGTTTCTCCGGCGGCTTAACCTCCACGACAACGCCTTCTCCGGCGTCCTCCCGGCGCAGCTCTCCAACGCCACTGCGCTCCACAGCCTCTTCCTCCACGGCAACAACCTCTCCGGCGCCATCCCCTCCTCCCTCTGCACCCTCCCCCGCCTCCAGAACCTCGACCTCTCCAAAAACGCCTTCTCCGGCCACATCCCGGAGCACCTCAAAAACTGCAAGAACCTCCAGCGCCTCGTCCTCGCCGGCAACAAATTCTCCGGCGAGATTCCCGCTGGCGTGTGGCCGGACCTCCGTAATCTACTCCAACTCGACCTTTCCGACAACGAGTTAACAGGCTCAATCCCCGGCGAAATCGGAACCCTAATTTCCCTCTCCGGTACGCTGAACCTCTCCTTCAACCACCTCTCCGGTAAAATTCCAGCTTCGTTAGGAAAATTACCGGCAACAGTGAGCTATGACCTCAAAAACAACAACCTCAGCGGCGAAATTCCCCAAACGGGATCGTTTTCGAACCAGGGCCCCACTGCGTTCCTCGGAAACCCGGACTTATGCGGGTTTCCGCTCAGGAAATCGTGTTCTGGTCTGGACCGGAATTTTTCTCCCGGTTCGGATCAGAACAAACCGGGTAATGGTAACCGGTCCAAGGGGCTGAGCCCCGGTTTAATTATTTTAATTTCGGCGGCTGATGCTGCTGTAGTGGCCTTCATTGGGCTTGTGATTGTGTACATTTATTGGAAGAGAAAGGATGATGAGAATGCTTGTAGTTGCATTAGGAAGAGGAGTTTTGGTGAAGAGAAAGGGAACATGTGTGTGTGTGGTGGATTATCATGTGTTGGTGGGGTGAAGAGTGATGATGATGAAGAGGAAGAGTATGAGGGGGGTGAGGGTGAGGGTGAAGGGGAATTGGTGAGGATTGACAAGGGTTTAAGTTTTGAGCTTGATGAGTTGTTAAGGGCTTCAGCTTATGTGTTGGGGAAGAGTGGGTTAGGGATTGTGTATAAGGTGGTGTTGGGGAATGGGGTGCCTGTGGCTGTGAGGAGGTTGGGGGAGGGTGGTGAACAGAGGTATAAGGAGTTTGCTGCTGAGGTTATGGCCATTGGGAAGGTCAAGCACCCTAATGTTGTGAGGTTGAGGGCTTACTATTGGGCACATGATGAGAAGCTTCTCATCAGTGATTTCATCTCCAATGGCAATTTGACTCATGCCCTTAGAGGGAGACATGGCCAACCATCTACAAATCTTTCATGGTCCACCAGGCTGAGAATCACCAAAGGAACAGCGAGGGGCCTGGCCTATCTCCACGAATGCAGTCCAAGAAAATTCGTCCATGGCGATATCAAGCCCTCCAACATTCTTCTTGACAACGACTTCCAGCCCTACATATCCGATTTTGGCCTTAACCGTCTAATCAGCATCACTGGCAACAACCCTTCCACCGGTGGATTCATGGGTGGAGCTCTTCCTTACATGAACTCATCACAGAAAGAGAGAACTAACAGTTACAAAGCCCCCGAGGCTCGTGTCCCTGGCTGCAGACCCACCCAGAAATGGGACGTGTACTCGTTCGGGGTCGTGCTACTAGAAATACTAACTGGGAGGTCACCAGAGTCATCTCCCACCACATCAACTTCCATGGAAGTCCCTGACTTAGTGAAGTGGGTGAGGAAAGGATTCGATCAAGAAAGCCCGTTATCTGAAATGGTTGATCCATCGCTGCTCCAAGAAGTGCGTGTTAAGAAAGAGGTGCTGGCTGTGTTTCATGTAGCACTGTCTTGTACTGAGGGAGACCCCGAGGCTAGGCCTAGGATGAAAACTGTCTCTGAAAATCTTGATAAGATTGGAACGTAA 2136 0.5295 MTLSSFLCLVFIFQFLFTSPSLSLSSDGLALLALKSAVDEPSAAAFSDWNNGDPTPCGWSGIACTNISGEAEPRVVGISLAGKSLSGYLPSELGTLRFLRRLNLHDNAFSGVLPAQLSNATALHSLFLHGNNLSGAIPSSLCTLPRLQNLDLSKNAFSGHIPEHLKNCKNLQRLVLAGNKFSGEIPAGVWPDLRNLLQLDLSDNELTGSIPGEIGTLISLSGTLNLSFNHLSGKIPASLGKLPATVSYDLKNNNLSGEIPQTGSFSNQGPTAFLGNPDLCGFPLRKSCSGLDRNFSPGSDQNKPGNGNRSKGLSPGLIILISAADAAVVAFIGLVIVYIYWKRKDDENACSCIRKRSFGEEKGNMCVCGGLSCVGGVKSDDDEEEEYEGGEGEGEGELVRIDKGLSFELDELLRASAYVLGKSGLGIVYKVVLGNGVPVAVRRLGEGGEQRYKEFAAEVMAIGKVKHPNVVRLRAYYWAHDEKLLISDFISNGNLTHALRGRHGQPSTNLSWSTRLRITKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLNRLISITGNNPSTGGFMGGALPYMNSSQKERTNSYKAPEARVPGCRPTQKWDVYSFGVVLLEILTGRSPESSPTTSTSMEVPDLVKWVRKGFDQESPLSEMVDPSLLQEVRVKKEVLAVFHVALSCTEGDPEARPRMKTVSENLDKIGT* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1064 711 Gene3D Transferase(Phosphotransferase) domain 1 490 711 - -
Gso1g1064 711 SUPERFAMILY Protein kinase-like (PK-like) 419 705 IPR011009 -
Gso1g1064 711 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 9 711 - -
Gso1g1064 711 Gene3D Ribonuclease Inhibitor 24 189 IPR032675 -
Gso1g1064 711 Pfam Leucine rich repeat 145 206 IPR001611 GO:0005515
Gso1g1064 711 ProSitePatterns Serine/Threonine protein kinases active-site signature. 537 549 IPR008271 GO:0004672|GO:0006468
Gso1g1064 711 CDD STKc_IRAK 420 709 - -
Gso1g1064 711 ProSiteProfiles Protein kinase domain profile. 414 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso1g1064 711 Gene3D Ribonuclease Inhibitor 190 290 IPR032675 -
Gso1g1064 711 SMART serkin_6 418 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso1g1064 711 Gene3D Phosphorylase Kinase; domain 1 406 489 - -
Gso1g1064 711 Pfam Protein kinase domain 419 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso1g1064 711 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Gso1g1064 711 SUPERFAMILY L domain-like 25 285 - -
Gso1g1064 711 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 9 711 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1064 Gso-Chr1 43701061 43706800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1064 18 709 Receptor kinase-like Gene Family AT1G67510 68.644 0.0 962
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso1g1064 Pkinase 1.4e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1064 - - gmx:100793996 1355.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1666 18 48651254 48656381 Gso1g1064 1 43701061 43706800 PCT
Gso7g1326 7 19286658 19291744 Gso1g1064 1 43701061 43706800 PCT