Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1041 ATGGGTTCTGGAAACCAGGAGGTATCAATGTTGGTGGAGAATGGTGGTGGTGGGAACAACAACGTGAAGGGATTGCTGAGCAAGGAAATGAGACATGGCAGAACGGCACATAACATGTCATCTTCTTCGTTGCGCAAGAAATCTGACCTAACTCTTCTGTCTAAGGTTCATTCTGACACCCTCAAGAATTTGTTGGTGAATTTGCAAGAGGTTATTCTGGGAACCAAGCTCTCTATTATTTTCCCTGCCATTCCCCTTGCCATTGTTGCTCAAAGCTATGGCTTTGGAAGACCTTGGATTTTTGCGTTGAGCTTACTTGGGCTTACCCCACTTGCTGAACGAGTCAGTTTCTTGACAGAACAGCTCGCTTATTACACTGGTCCCACAGTGGGAGGACTTTTGAATGCAACATGTGGGAATGCTACAGAGCTCATCATAGCAATTTTTGCTCTTAGCAATAACAAAATTGCAGTGAGACAGGCAGATATAAACTTGCTTATGCTGTTTGTGGCATTGCTAAGCCACTTGCTGCCAGTGCTGTTCCATTACGTTGGTGCCTCAGCAGCTGACACTGTAGAGTCTTCTCTGCAGTTGTCAAGAGTTGCTAGCATTGTTATGGTGACTGCTTATTGTGCTTACCTTGTCTTCCAATTGTGGACTCACCGGCAGCTATTTGAAGCCCAAGATGAAGCTGATGAAGAGGGTGGCAATGATTCAGAAGAAGCAGTGATAGGATTCTGGAGTGCATTTGCTTGGCTGGTTGGGATGACAGTGATCATTGCCCTGCTGTCTGAATATGTGGTGCACACAATTGAGGATGCATCTGATTCATGGGGATTGTCTGTTAGCTTCCTAAGCATAATCTTACTACCAATAGTTGGCAATGCAGCTGAACATGCAGGAGCAATCATATTTGCTTTCAAGAACAAACTGGACATCTCATTGGGTGTTTCCTTGGGTTCGGCAACTCAAATTAGCATGTTTGTGGTTCCCCTATGTGTGATTGTTGCTTGGATTCTGGGAATCAAAATGGACCTCAACTTTAACATCCTAGAGACAGGTTCTCTTGCTGTGGCAATAACAATCACAGCCTTCACATTACAGGATGGAACATCTCATTACATGAAAGGCCTTGTTCTCGTACTCTGCTACATTATTATTGGGGCATGCTTTTTTGTACAAAGAACACCCTCCAACCAAACTAATGTTCCTAACATAACGCATAAATCAACAACTGAAGCAGTTTTTAGAGCTCAATAG 1260 0.4381 MGSGNQEVSMLVENGGGGNNNVKGLLSKEMRHGRTAHNMSSSSLRKKSDLTLLSKVHSDTLKNLLVNLQEVILGTKLSIIFPAIPLAIVAQSYGFGRPWIFALSLLGLTPLAERVSFLTEQLAYYTGPTVGGLLNATCGNATELIIAIFALSNNKIAVRQADINLLMLFVALLSHLLPVLFHYVGASAADTVESSLQLSRVASIVMVTAYCAYLVFQLWTHRQLFEAQDEADEEGGNDSEEAVIGFWSAFAWLVGMTVIIALLSEYVVHTIEDASDSWGLSVSFLSIILLPIVGNAAEHAGAIIFAFKNKLDISLGVSLGSATQISMFVVPLCVIVAWILGIKMDLNFNILETGSLAVAITITAFTLQDGTSHYMKGLVLVLCYIIIGACFFVQRTPSNQTNVPNITHKSTTEAVFRAQ* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1041 419 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 159 406 - -
Gso1g1041 419 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 3 158 - -
Gso1g1041 419 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 3 158 IPR004713 GO:0006812|GO:0008324|GO:0016021
Gso1g1041 419 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 159 406 IPR004713 GO:0006812|GO:0008324|GO:0016021
Gso1g1041 419 Gene3D - 128 392 IPR044880 -
Gso1g1041 419 Pfam Sodium/calcium exchanger protein 99 155 IPR004837 GO:0016021|GO:0055085
Gso1g1041 419 Pfam Sodium/calcium exchanger protein 249 387 IPR004837 GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1041 Gso-Chr1 42738618 42743191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1041 27 400 Antiporters AT2G38170 65.301 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1041 K07300 - gmx:100797538 786.949