Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1020 ATGGAAGGTACTCATCATCTCCATCACCATCACCAAGGGCATCAACAACAACAGCAACAAAGGGTTCTTCCTCAGAATATGAACGTGGATGTGACCGATAGATTTCCTCAATGGAGCATCCAAGAAACAAAGGAGTTTCTGGTGATCCGTGAAGAGCTGGATCAGACTTTCATGGAGACTAAGAGGAACAAGCAGTTGTGGGAAGTGATATCTAACCGAATGAAGGAAAAGGGTTACCATAGAAGTGCAGAGCAGTGCAAGTGCAAGTGGAAAAACCTTGTTACCCGCTATAAGGGATTTGAAACAATGGAGCAAGAAGCGACGAGACAGCAATTCCCGTTTTACAATGAATTCAATGCGATTTTCACAGCAAGGATGCAGAGAATGCTGTGGGCAGAAGCTGAGGGTGGATCAAAGAAGAACAAGGCAACAACGCAGCTCTCATCGGACGAAAATGAAGAGAGTACTGAAGCCGGTAGCGGCAGAAAGAAGAAGAAAGCAAAGATAGGTAGTAGGGGTGGTGATAACTGTAGTGGTAGTTTCAACAGTTTGAAGGAGATTTTGGAGGAGTTCATGAGGCAACAGATGCAAATAGATACACAATGGATGGAAGCGTTTGAGGCGAGGGAGAATGAGAGGAGGCTGAAGGAGATGGAATGGAGACAAGCCATGGAGGTGTTGGAGAATGAGAGGATAATGATGGAGGAAAGATGGAGAGAAAGGGAGGAACAAAGGAGGATTAGGGAAGAAGCTAGGGCTGAGAAGAGGGATGCACTAATCACAGCTTTGCTAAACAAGCTAGAGAGACAAGGAATGTAG 819 0.4542 MEGTHHLHHHHQGHQQQQQQRVLPQNMNVDVTDRFPQWSIQETKEFLVIREELDQTFMETKRNKQLWEVISNRMKEKGYHRSAEQCKCKWKNLVTRYKGFETMEQEATRQQFPFYNEFNAIFTARMQRMLWAEAEGGSKKNKATTQLSSDENEESTEAGSGRKKKKAKIGSRGGDNCSGSFNSLKEILEEFMRQQMQIDTQWMEAFEARENERRLKEMEWRQAMEVLENERIMMEERWREREEQRRIREEARAEKRDALITALLNKLERQGM* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1020 272 Gene3D - 38 99 - -
Gso1g1020 272 PANTHER - 1 272 - -
Gso1g1020 272 PANTHER TRANSCRIPTION FACTOR MYB FAMILY-RELATED 1 272 - -
Gso1g1020 272 MobiDBLite consensus disorder prediction 1 22 - -
Gso1g1020 272 MobiDBLite consensus disorder prediction 134 175 - -
Gso1g1020 272 CDD GT1 36 99 - -
Gso1g1020 272 Pfam Myb/SANT-like DNA-binding domain 37 121 IPR044822 -
Gso1g1020 272 MobiDBLite consensus disorder prediction 139 154 - -
Gso1g1020 272 ProSiteProfiles Myb-like domain profile. 38 94 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1020 Gso-Chr1 41475091 41477035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1020 5 271 Trihelix Transcription Factor Family AT2G38250 55.914 3.89e-70 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gso1g1020 Myb_DNA-bind_4 4.3e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1020 - - gmx:100791013 468.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1020 1 41475091 41477035 Gso3g0700 3 21471322 21472825 GST