LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso1g1019	ATGGATAAAAGCAATGGCTGCAGCTTCTCTAGCATATCTTCAATTGCTGTCTTTTCAAGTGCTGTTTTTGTTGTCTCCTTGATTTTGGTTCGTCTCCTTTATGTCTTATACTGTAGCAGCAAGCCCTTGAGCAAAAGGGCTTCAAAACCTTTTAGTACCCTTATTATTTTAGGATCAGGTGGTCATATTGCTGAGATGCTTAATCTACTAGCAGTGTTACAGAAAGGTAGGTTTAATCCAAGATTCTACATTGTTGTTGCTACTGATAATATGAGTCTTCAAAAAGCTCAGTTGTTGGAGAATTCCCTGGCTGCTGAGTACGTTCATGATGAATCAGAAACTTTATCTGATATTGATGATGAAGAAGTTGATTTGTACATTCATGATGAGGAGGGGAAGCATATCAAGAAGATACTGTGGGAAACAACATATAGGGAGTATCTTGAGGAGCAGGCAGCCAAGGAAGCAGCTGCAGCAGCTAGCAAGAAAGCTTTTGAGGCAAAATTTGAAAACTGTTCGGAGGATATACTAGCGGCAAGAGAGCTTGCTGCATCTTCTACTGAAGCTGTGGCAAAATCCAAAAAGGAAATGAGACAGAAACGAGCTTATGAGGCAAAAAATACAAGGCCAGCTCAATCTGCTGCAGAGGCCTTTGGCCAAATGTCTAATAAAAAAAGGAATTTGCAGGGTCTCAAATCTAAAGTCAATTTTAAACTCCTGAATGAATTGTTTGATGAAATGGATACGCAGGAAAATACCGATGGTCTCAAGAAACAGAAGAAAGTACCTATAATTTGTTTTCGGAGCATTCTTTAA	816	0.3922	MDKSNGCSFSSISSIAVFSSAVFVVSLILVRLLYVLYCSSKPLSKRASKPFSTLIILGSGGHIAEMLNLLAVLQKGRFNPRFYIVVATDNMSLQKAQLLENSLAAEYVHDESETLSDIDDEEVDLYIHDEEGKHIKKILWETTYREYLEEQAAKEAAAAASKKAFEAKFENCSEDILAARELAASSTEAVAKSKKEMRQKRAYEAKNTRPAQSAAEAFGQMSNKKRNLQGLKSKVNFKLLNELFDEMDTQENTDGLKKQKKVPIICFRSIL*	272

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso1g1019	271	PANTHER	GLYCOSYL TRANSFERASE-RELATED	9	109	IPR013969	GO:0006488
	Gso1g1019	271	Pfam	Brf1-like TBP-binding domain	116	245	IPR011665	-
	Gso1g1019	271	Pfam	Oligosaccharide biosynthesis protein Alg14 like	54	105	IPR013969	GO:0006488
	Gso1g1019	271	Gene3D	Single helix bin	107	158	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso1g1019	Gso-Chr1	41421348	41427364	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso1g1019	122	225	Inorganic Solute Cotransporters	AT2G01280	41.346	8.52e-09	53.9

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso1g1019	K15196		-	gsj:114377478	478.018