Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1018 ATGACTTACGTTCATGATGAATCAGAAACTTTATCTGATATTGATGATGAAGAAGTTGATTTGTACATTGATGATGAGGAGGGGAAGCATATCAAGAAGATACTGTGGGAAACAACATATAGGGAGTATCTTGAGGAGCAGGCAGCCAAGGAAGCAGCTGCAGCAGCTAGCAAGAAAGCTTTTGAGGCAAAATTTGAAAACTGTTCGGAGGATATACTAGCGGCAAGAGAGCTTGCTGCATCTTCTACTGAAGCTGTGGCAAAATCCAAAAAGGAAATGAGACAGAAACGAGCTTATGAGGCAAAAAATACAAGGCCAGCTCAATCTGCTGCAGAGGCCTTTGGCCAAATGTCTAATAAAAAAAGGAATTTGCAGGGTCTCAAATCTAAAGTCAATTTTAAACTCCTGAATGAATTGTTTGATGAAATGGATACGCAGGAAAATACCGATGGTCTCAAGAAATAG 465 0.4 MTYVHDESETLSDIDDEEVDLYIDDEEGKHIKKILWETTYREYLEEQAAKEAAAAASKKAFEAKFENCSEDILAARELAASSTEAVAKSKKEMRQKRAYEAKNTRPAQSAAEAFGQMSNKKRNLQGLKSKVNFKLLNELFDEMDTQENTDGLKK* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1018 154 Pfam Brf1-like TBP-binding domain 12 141 IPR011665 -
Gso1g1018 154 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 5 141 IPR000812 GO:0006352|GO:0070897
Gso1g1018 154 PANTHER TRANSCRIPTION FACTOR IIIB 90 KDA SUBUNIT 5 141 IPR029529 GO:0000126|GO:0000995|GO:0006383
Gso1g1018 154 MobiDBLite consensus disorder prediction 87 101 - -
Gso1g1018 154 MobiDBLite consensus disorder prediction 84 114 - -
Gso1g1018 154 Gene3D Single helix bin 3 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1018 Gso-Chr1 41411213 41416314 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1018 18 121 Inorganic Solute Cotransporters AT2G01280 41.346 9.32e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1018 K15196 - gsj:114377478 273.478