Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1017 ATGGCCAAGCCACAAAATACAAAACCCGGGTGTTTCTCTTTCTCAAGCTTCCTACGCGTGTTTCTATGTGCTGGAAATGGAACTACTCCACCAGTGCACCCTTATCACATTACAGAATCAGAAGAATCAGAAAATGCACATTTCACCAAAGAAAAAATGGTGGTGAATGATAATGATGATATTGCTTCTGCCCCTGGAGTGGTGGCAAGGCTAATGGGGCTGGATTCATTTCCAAACCCCAAATGGGTAGTGAAATGTGGCACCCCAGATTCGGTTCCTAGAAGCAGGTCAGTGAACTTTGTGGATTACTTGCTTGAGTTTGATGCAAGCCATGTTAGTAGCCATAGGAGGGTGAAGACCTCGGCATCGTTCAGAGAGGTTCCTAGTTTGGTTCAGAACCAAAAGGGTAATGGTTATGGTAATGGTAATAATCTCTTTGTGTTTTGCATGGCTGGTGACAATAACATGAGGGAAGAGCAAGAGGGTAGAAATGAGATGAGGGAAGTGGAAAAGTTGAGGCAGAGGAAGAGGCAGAAGGAGAGTGTGAGTGTGAAGAAAGAGAGGAATCAAGGGAAGAAGAACAAGAAGATTTCCAAGCTGAAGAATGAACCAAGGAGGGTCCCTTCTTCTTCTAAGAATGGTTCAAGGGGTCGAAATCATCATGGTGAGGTTAGAGATTTTTCTTCTGTGTCCTCAAACCCCTCTAAGTGTAGTAGTTCTTGTAGTAGCAGACACAATGGTGCTAGTTCAAGAACAAGGTTCAACACTTCTTTGCCAAATAAGAACAAAAAGGGGGTTGTGGAACCAAATATCAGGAATAGAAACCAGCAGTCAGTGTTGAAGGAAGAAAGTGAATGCAGCTTGGAAAACCACAGTCCTGTTTCAGTTGTAGAGAGCAATGACTATCTTTTCCTGTATGGAGCTGATTTTCTAGATGGTTCAAGCTCCCTTACGTCAAAGTGGGAATCTCCATCACTATTGTCCTTGGGTGATGATGTTGAAGACAATGCAAGTACTAATGAAGGTTATACCTTCATTGATGTCAACAAGGAAGCAGAGTATTACTCAGAATTGATGTTGAAGCTTCGTACTTTGACTGAACAGGATATAAGAGAATCAGATTGTACCTCAAAACGTGTACGCGATATTGAAAGCTTTGGGGATATTTGTTTGATGTTTGAGCATAAAATTTTCGACCACTTATTATATGAGGTCGTCAATGAAGTTATAGAACTTTATTGTTGA 1245 0.4169 MAKPQNTKPGCFSFSSFLRVFLCAGNGTTPPVHPYHITESEESENAHFTKEKMVVNDNDDIASAPGVVARLMGLDSFPNPKWVVKCGTPDSVPRSRSVNFVDYLLEFDASHVSSHRRVKTSASFREVPSLVQNQKGNGYGNGNNLFVFCMAGDNNMREEQEGRNEMREVEKLRQRKRQKESVSVKKERNQGKKNKKISKLKNEPRRVPSSSKNGSRGRNHHGEVRDFSSVSSNPSKCSSSCSSRHNGASSRTRFNTSLPNKNKKGVVEPNIRNRNQQSVLKEESECSLENHSPVSVVESNDYLFLYGADFLDGSSSLTSKWESPSLLSLGDDVEDNASTNEGYTFIDVNKEAEYYSELMLKLRTLTEQDIRESDCTSKRVRDIESFGDICLMFEHKIFDHLLYEVVNEVIELYC* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1017 414 PANTHER OS05G0128300 PROTEIN 1 413 - -
Gso1g1017 414 PANTHER ALC-INTERACTING PROTEIN 1 1 413 - -
Gso1g1017 414 MobiDBLite consensus disorder prediction 158 285 - -
Gso1g1017 414 Pfam DUF761-associated sequence motif 64 78 IPR032795 -
Gso1g1017 414 Coils Coil 155 189 - -
Gso1g1017 414 MobiDBLite consensus disorder prediction 158 188 - -
Gso1g1017 414 MobiDBLite consensus disorder prediction 226 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1017 Gso-Chr1 41386096 41388183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1017 1 409 TRM (TON1 Recruiting Motif) Superfamily AT5G01370 26.724 4.38e-14 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1017 - - gmx:102668485 786.563