Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0991 ATGAAAATTCTGCAAGTCTCAGCACTGATGATGCTATTTTATTGGTTATGCGTTTTTTTCACAGCAGCAGAAACTTCATCCATCACACAATCCCAGTCCCTCAGTTACAGAAAGACCCTAGTTTCCCCAAGTGGAATCTTCGAACTCGGTTTCTTCAATCTTGGAAATCCGAACAAAATCTACCTTGGAATTTGGAACAAGAATATTCCACTTCAAAACATAGTTTGGGTTGCAAACGGTGGTAGTCCAATCAAGGATTCTTCTTCCATCTTGAAACTAGACAGTTCTGGCAATTTGGTCCTTACACACAACAACACAGTTGTTTGGAGCACAAGTTCTCCAGAAAAGGCACAGAATCCGGTGGCAGAGCTCTTGGATTCTGGCAATCTTGTGATAAGAGATGAGAATGGAGGAAATGAAGACGCATATATGTGGCAAAGCTTTGATTACCCATCTAATACTATGCTGCAAGGAATGAAGGTTGGATGGGACCTCAAAAGAAATTTTAGTACTCGCCTGATAGCTTGGAAGAGTGACGATGATCCAACCCAAGGAGACTTATCTTGGGGCATTATCCTGCACCCTTATCCTGAGATCTATATGATGAAGGGAACAAAAAAGTACCATAGACTTGGACCATGGAATGGTTTGCGTTTCAGTGGCTTTCCACTTATGAAGCCTAATAACCACATATACTATTCTGAGTTTGTCTGCAACCAGGAAGAGGTTTATTTCAGATGGAGCCTCAAGCAGACTAGTTCAATATCAAAAGTGGTACTTAACCAAACCACACTGGAACGTCAGCGTTATGTATGGTCTGGGAAATCATGGATTTTATATGCAGCACTGCCAGAAGACTACTGTGACCATTATGGAGTTTGTGGAGCCAATACATACTGCACCACTTCTGCATTACCAATGTGTCAATGTTTAAAAGGGTTCAAGCCTAAGTCTCCTGAGGAATGGAACTCAATGAACTGGTCTGAAGGATGTGTCCGGAAACATCCACTTAGCTGCAAAAATAAGCTCAGTGATGGGTTTGTACTAGTGGAAGGCTTGAAAGTGCCGGATACTAAAGATACGTTTGTGGATGAGACTATTGATCTAAAACAATGCAGAACCAAGTGCTTGAATAAATGTTCCTGCATGGCGTATACCAATTCAAATATAAGTGGAGCAGGCAGTGGCTGTGTTATGTGGTTTGGTGATTTATTTGACATCAAACTGTATCCAGAGAATGGGCAGAGTCTATATATAAGGTTGCCTGCTTCAGAATTAGAGTTTATCAGGTACAAGAGGAACTCTATAATAATAATTGTAACCTCCGTTGCTGCAACTTTGGTAGTGATGGTAGTGACACTTGCTATTTATTTCATCAGAAGAAGGAAAATTGCCGACAAGTCAAAGACAGAAGAGAACATCGAAAGACAGCTAGATGATATGGATGTGCCATTGTTTGATCTTCTAACAGTCACTACTGCCACCAACAATTTTTCATTGAATAATAAGATTGGACAAGGTGGTTTTGGACCTGTATATAAGGGAGAATTAGTGGATGGGCGAGAAATTGCTGTCAAGCGACTATCAACTAGCTCTGGACAAGGAATAAATGAGTTCACAGCAGAAGTAAAACTGATTGCAAAGCTTCAACACCGAAATCTTGTAAAGCTCCTTGGCTGTTGCTTTCAAGGACAAGAAAAATTACTAATATATGAATACATGGTTAATGGCAGCCTAGACACCTTCATTTTTGATAAAGTGAAAGGTAAATTATTGGATTGGCCCCGACGCTTCCACATAATACTTGGAATTGCTAGAGGACTTTTGTATCTCCATCAAGATTCCCGATTAAGGATTATTCATAGAGATCTCAAAGCAAGTAATGTTTTACTTGATGAAAAGTTCAATCCTAAAATATCAGATTTTGGAACAGCAAAAGCTTTTGGAGGAGACCAAATCGAAGGAAACACAAAAAGAGTAGTTGGGACTTATGGATACATGGCCCCAGAATATGCTGTTGCTGGACTATTTTCAATCAAATCAGACGTTTTCAGCTTTGGTATTTTACTGTTGGAGATTGTATGTGGAATAAAAAATAAAGCTCTTTGTGATGGAAACCAGATTCATAGCCTTGCATGGACACTTTGGAAAGAGAAAAATGCTTTACAGTTGATTGACTCAAGCATAAAGGACTCATGTGTTATCTCAGAAGTACTGCGATGCATCCATGTTAGTCTCTTGTGCTTGCAACAATACCCGGGAGATAGGCCAACCATGACATCAGTAATTCAAATGTTAGGGAGTGAGATGGAACTGGTTGAGCCAAAGGAGCTTAGTTTCTTTCAAAGCAGGATTTTGGATGAAGGAAAATTAAGCTTTAATCTAAACCTAATGACTTCAAATGATGAATTAACCATTACCTCATTAAATGGCCGGTGA 2439 0.3965 MKILQVSALMMLFYWLCVFFTAAETSSITQSQSLSYRKTLVSPSGIFELGFFNLGNPNKIYLGIWNKNIPLQNIVWVANGGSPIKDSSSILKLDSSGNLVLTHNNTVVWSTSSPEKAQNPVAELLDSGNLVIRDENGGNEDAYMWQSFDYPSNTMLQGMKVGWDLKRNFSTRLIAWKSDDDPTQGDLSWGIILHPYPEIYMMKGTKKYHRLGPWNGLRFSGFPLMKPNNHIYYSEFVCNQEEVYFRWSLKQTSSISKVVLNQTTLERQRYVWSGKSWILYAALPEDYCDHYGVCGANTYCTTSALPMCQCLKGFKPKSPEEWNSMNWSEGCVRKHPLSCKNKLSDGFVLVEGLKVPDTKDTFVDETIDLKQCRTKCLNKCSCMAYTNSNISGAGSGCVMWFGDLFDIKLYPENGQSLYIRLPASELEFIRYKRNSIIIIVTSVAATLVVMVVTLAIYFIRRRKIADKSKTEENIERQLDDMDVPLFDLLTVTTATNNFSLNNKIGQGGFGPVYKGELVDGREIAVKRLSTSSGQGINEFTAEVKLIAKLQHRNLVKLLGCCFQGQEKLLIYEYMVNGSLDTFIFDKVKGKLLDWPRRFHIILGIARGLLYLHQDSRLRIIHRDLKASNVLLDEKFNPKISDFGTAKAFGGDQIEGNTKRVVGTYGYMAPEYAVAGLFSIKSDVFSFGILLLEIVCGIKNKALCDGNQIHSLAWTLWKEKNALQLIDSSIKDSCVISEVLRCIHVSLLCLQQYPGDRPTMTSVIQMLGSEMELVEPKELSFFQSRILDEGKLSFNLNLMTSNDELTITSLNGR* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0991 812 ProSiteProfiles Bulb-type lectin domain profile. 25 145 IPR001480 -
Gso1g0991 812 Pfam PAN-like domain 339 407 IPR003609 -
Gso1g0991 812 Pfam Protein tyrosine and serine/threonine kinase 499 766 IPR001245 GO:0004672|GO:0006468
Gso1g0991 812 ProSiteProfiles Protein kinase domain profile. 498 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso1g0991 812 SMART ntp_6 342 421 IPR003609 -
Gso1g0991 812 SMART blect_4 31 151 IPR001480 -
Gso1g0991 812 SUPERFAMILY Protein kinase-like (PK-like) 481 766 IPR011009 -
Gso1g0991 812 CDD PAN_AP_plant 335 422 - -
Gso1g0991 812 CDD STKc_IRAK 504 766 - -
Gso1g0991 812 ProSiteProfiles PAN/Apple domain profile. 339 422 IPR003609 -
Gso1g0991 812 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 34 811 - -
Gso1g0991 812 PIRSF SRK 1 812 IPR024171 GO:0004674
Gso1g0991 812 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Gso1g0991 812 Gene3D - 19 148 IPR036426 -
Gso1g0991 812 CDD B_lectin 31 151 IPR001480 -
Gso1g0991 812 Gene3D Phosphorylase Kinase; domain 1 459 573 - -
Gso1g0991 812 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 182 IPR036426 -
Gso1g0991 812 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 34 811 - -
Gso1g0991 812 Pfam S-locus glycoprotein domain 210 318 IPR000858 GO:0048544
Gso1g0991 812 Gene3D Transferase(Phosphotransferase) domain 1 574 779 - -
Gso1g0991 812 Pfam D-mannose binding lectin 74 177 IPR001480 -
Gso1g0991 812 SMART serkin_6 498 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0991 Gso-Chr1 40518527 40528445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0991 434 768 Receptor kinase-like Gene Family AT4G23230 53.235 7.04e-115 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso1g0991 PK_Tyr_Ser-Thr 5.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0991 - - gmx:100796821 1605.5