Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0983 ATGGCAAGTTCAGTTGTGGTTGCTAATGGGAACTTGAATCCAAATGATACAAGGGGAAAGACCATTACATGCAAAGCTGCCGTGGCATATGGTCCTGGAGAGCCCTTTGTGGTGGAACGTATCCTTGTCCATCCTCCTCAGAAAATCGAGGTTCGAATCAAGATCCTCTTCACCACAATCTGTCACACGGATCTCACGGCTTGGCAAGGCGAGAATGAGGCTCGACGTGCTTATCCTCGGATTTTTGGCCATGAAGCTTCCGGGATTGTGGAGAGTGTGGGTGAAGGTGTAAGTGACATGAATGAAGGGGACTTGGTGGTGCCAATCTTCAATGGGGAATGTGGGGATTGCAAATATTGCAAGTGCGAGAAGACCAACAAGTGTGAGAGATTTGGGGTGGATGCTATGAAGAAGGTGATGGTTAGTGATGGTGCAACAAGGTTTTACACAATGGATGGAAAACCCATATTCCATTTCTTGAACACTTCAACTTTCACTGAGTACACAGTGGTGGATTCAGCATGCATCGTCAAGATTCACATTGATGGTAGTAATGGCGATCTCAACCGCAATATCAAAAGACTCACCTTACTCAGTTGTGGCGTATCTTCGGGTGTTGGGGCTGCTTGGAATACCGCTGATGTGCATTTTGGTTCAACTGTAGCTGTCTTTGGTTTAGGTGTTGTGGGTCTCGCTGTAGCAGAAGGGGCACGAGCCAGAGGTGCATCCAGAATTATAGGCGTAGATATCAACTCAGACAAATTCATCAAAGCCCGAGAAATGGGTATCACCGACTTCATAAATCCAAAGGATGATGAGAGACCAGTATATGAGATAATTGGGGAAATGACTGGTGGGGGCGTGCACTATAGTTTTGAATGTGCTGGAAATTTGAACGTTCTAAGGGATGCCTTCTTGTCTGCTCATGAGGGTTGGGGATTGACTGTGCTAGTAGGGATTCATCTATCACCAAAAATGCTTCCCATCCACCCAATGGAGTTGTTCCATGGTCGCAGAATAGTAGGATCAAATTTCGGAGGCATCAAAGGGAAGACTCAATTGCCACATTTTGCCAAAGAATGCATGAATGGAGTGGTGAAGTTAGATGATTTTATCACTCACGAGCTTCCTTTCAAGGAGATAAACCAGGCCTTCGATCTTTTGACCACTGGAAAGTCACTGAGATGTCTTCTACACTTCTGA 1203 0.4572 MASSVVVANGNLNPNDTRGKTITCKAAVAYGPGEPFVVERILVHPPQKIEVRIKILFTTICHTDLTAWQGENEARRAYPRIFGHEASGIVESVGEGVSDMNEGDLVVPIFNGECGDCKYCKCEKTNKCERFGVDAMKKVMVSDGATRFYTMDGKPIFHFLNTSTFTEYTVVDSACIVKIHIDGSNGDLNRNIKRLTLLSCGVSSGVGAAWNTADVHFGSTVAVFGLGVVGLAVAEGARARGASRIIGVDINSDKFIKAREMGITDFINPKDDERPVYEIIGEMTGGGVHYSFECAGNLNVLRDAFLSAHEGWGLTVLVGIHLSPKMLPIHPMELFHGRRIVGSNFGGIKGKTQLPHFAKECMNGVVKLDDFITHELPFKEINQAFDLLTTGKSLRCLLHF* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0983 400 Gene3D - 27 395 - -
Gso1g0983 400 PANTHER ALCOHOL DEHYDROGENASE 17 399 - -
Gso1g0983 400 SUPERFAMILY GroES-like 17 182 IPR011032 -
Gso1g0983 400 PANTHER ALCOHOL DEHYDROGENASE-LIKE 3 17 399 - -
Gso1g0983 400 Gene3D - 205 343 - -
Gso1g0983 400 SUPERFAMILY GroES-like 350 400 IPR011032 -
Gso1g0983 400 Pfam Zinc-binding dehydrogenase 229 348 IPR013149 -
Gso1g0983 400 Pfam Alcohol dehydrogenase GroES-like domain 50 177 IPR013154 -
Gso1g0983 400 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 195 364 IPR036291 -
Gso1g0983 400 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 83 97 IPR002328 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0983 Gso-Chr1 40090206 40097833 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0983 50 388 Monolignol Biosynthesis Gene Families AT2G21890 24.011 1.21e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0983 K00001 - gmx:100785720 784.252