Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0982 ATGCACAACATGTCTGAACAGCTAGGGAGAAGAAAGATGGAAGATCCAGAGGTTATTATTGGGAGCTTGAATCCAAATGATACCAGGGGAAAGACCGTTACTTGCAAAGCTGCCGTGGCATATGGTCCTGGAGAGCCCTTTGTGGTGGAACGTGTTCTTGTTCATCCTCCTCAGAAAATGGAGGTTCGAATCAAGATCCTCTTCACTTCAATCTGCCACACCGATCTCAGTGCTTGGCAAGGCGAGAATGAGGCTCAACGTGCATATCCTCGGATTTTCGGCCATGAAGCTTCCGGGATTGTGGAGAGTGTGGGTGAAGGAGTAAATGACATGAAAGAAGGGGACTTGGTGGTGCCAATTTTCAATGGGGAATGTGGGGATTGTAAATATTGCAAGTGTGAGAAAACCAACATGTGTGAGAGATTTGGGGTGGATCCTATGAAGAAGGTGATGGCTAGTGATGGTGCCACTAGGTTTTCTACAATGGATGGAAAACCCATCTTCCATTTCTTGAACACTTCAACTTTCACGGAGTACACGGTGGTGGATTCAGCATGCGTCGTCAAGATTCACGTTGATGGCGATGGCGACCTCAATCCCTACATTAAAAGACTTACCTTACTCAGTTGTGGTGTATCTACGGGTGTTGGAGCTGCTTGGAATACCGCTGATGTGCATTTTGGTTCAGCTGTAGCTGTCTTTGGTTTAGGTGCTGTGGGTCTCTCTGTAGCAGAAGGGGCACGAGCCAGAGGTGCATCCAAAATAATAGGCGTGGACATCAATTCTGACAAATTTATCAAAGCCCGAGCAATGGGCATCACTGACTTCATAAATCCAAGGGATGATGAGAAGCCAGTATATGAGAGGATCAGGGAAATGACTTGTGGAGGTGTGCACTATAGTTTTGAATGTACTGGAAATTTAAACGTTCTAAGGGATGCCTTCTTGTCAGCTCATGAGGGTTGGGGATTGACTGTGATATTAGGGATTCATCCATCACCACAATTGCTTCCCATCCACCCAATGGAGTTGTTCCAAGGTCGCAGAATAGTAGGATCAGTTTTTGGAGGCTTCAAAGGGAAGACTCAATTGCCACATTTTGCCAAAGAATGCATGGATGGAGTGGTGAAGTTGGATGATTTTATCACTCACGAGCTTCCAATCGAGGAGATAAACAAGGCCTTTGATCTTTTAACCGTCGGAAAGTCACTGAGATGTCTTCTACACTTCTAA 1233 0.4566 MHNMSEQLGRRKMEDPEVIIGSLNPNDTRGKTVTCKAAVAYGPGEPFVVERVLVHPPQKMEVRIKILFTSICHTDLSAWQGENEAQRAYPRIFGHEASGIVESVGEGVNDMKEGDLVVPIFNGECGDCKYCKCEKTNMCERFGVDPMKKVMASDGATRFSTMDGKPIFHFLNTSTFTEYTVVDSACVVKIHVDGDGDLNPYIKRLTLLSCGVSTGVGAAWNTADVHFGSAVAVFGLGAVGLSVAEGARARGASKIIGVDINSDKFIKARAMGITDFINPRDDEKPVYERIREMTCGGVHYSFECTGNLNVLRDAFLSAHEGWGLTVILGIHPSPQLLPIHPMELFQGRRIVGSVFGGFKGKTQLPHFAKECMDGVVKLDDFITHELPIEEINKAFDLLTVGKSLRCLLHF* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0982 410 PANTHER ALCOHOL DEHYDROGENASE-LIKE 3 28 409 - -
Gso1g0982 410 Pfam Zinc-binding dehydrogenase 238 358 IPR013149 -
Gso1g0982 410 Pfam Alcohol dehydrogenase GroES-like domain 61 189 IPR013154 -
Gso1g0982 410 PANTHER ALCOHOL DEHYDROGENASE 28 409 - -
Gso1g0982 410 Gene3D - 215 353 - -
Gso1g0982 410 SUPERFAMILY GroES-like 28 197 IPR011032 -
Gso1g0982 410 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 206 374 IPR036291 -
Gso1g0982 410 SUPERFAMILY GroES-like 360 410 IPR011032 -
Gso1g0982 410 Gene3D - 38 405 - -
Gso1g0982 410 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 94 108 IPR002328 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0982 Gso-Chr1 40035081 40051364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0982 61 398 Monolignol Biosynthesis Gene Families AT2G21890 25.779 6.34e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0982 K00001 - gmx:100787307 819.69