Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0960 ATGAGGGACTTGAAAACTTTAAAGGAATTGGTGGCAAGCGTTACAGATTGGAAGTCGCTCGAGAAGATGTCTTGCAAACCCTTTAAGCCTTCCATTTTGCATTTGGCAATATCACAAGATGCGCCCCACTTATATAGCGAAGAACAGTTGATTCAATTAAAGAAATTAAGCAAACTACTTTCAAGCGCTGAATCGAAGCCAAATACAAATAAGACTGATAAGAGGGTGACCAAAAAAAGACAAATTGAAGAGAGACCTAAAGAAGAAAGAGTCATGCCAGCAACGATTAAAAAACCAAGAAAGATAATCTTGGAACAGAACGGACCATCACCAGATTTGTCAAGAAGGATAATCTTGGGACATAGCGGACCATCACCAGATTTGCCGCCAAGAAGGATAATCTTGGAACATAGCGGGCCATCACCAGATTTGCCAATGCAATTCAAGAACCGAGTAGCTGAGTTGAGTGGTCATGATCTTAAATATTTGATGCACAAGAGACTCTTCTGGTCAGACCTGAAGCCGAACAACAATCGTCTCTCCATGCCCATAAATGAAATTATGTGTGAATTTCTCACACAAGCTGAGATTGAAAAATTGGATGAAAGAAATGGAAGGAACGGAAAAGGACGGCTCGTTGGTCTGGAATTGACTGTGTTAGACCCATGTCTGAGAGAATTTACTTTACCATTGAAGAAGTGGAGCATGCAAAGGACTGACACCTATAACCTGGTAACAGATTGGAATAGTATCGTATCTACTAATGAGTTTGAAGAAGGTCAAGAGCTCCAAATTTGGTCTTTTAGGGTTGATAACAAGTTATATCTTATCCTAAACAAACTGTGA 846 0.3995 MRDLKTLKELVASVTDWKSLEKMSCKPFKPSILHLAISQDAPHLYSEEQLIQLKKLSKLLSSAESKPNTNKTDKRVTKKRQIEERPKEERVMPATIKKPRKIILEQNGPSPDLSRRIILGHSGPSPDLPPRRIILEHSGPSPDLPMQFKNRVAELSGHDLKYLMHKRLFWSDLKPNNNRLSMPINEIMCEFLTQAEIEKLDERNGRNGKGRLVGLELTVLDPCLREFTLPLKKWSMQRTDTYNLVTDWNSIVSTNEFEEGQELQIWSFRVDNKLYLILNKL* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0960 281 MobiDBLite consensus disorder prediction 61 90 - -
Gso1g0960 281 Gene3D - 154 280 IPR015300 -
Gso1g0960 281 MobiDBLite consensus disorder prediction 68 90 - -
Gso1g0960 281 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 2 279 IPR005508 GO:0003677
Gso1g0960 281 SUPERFAMILY DNA-binding pseudobarrel domain 163 278 IPR015300 -
Gso1g0960 281 Pfam B3 domain-containing protein At2g31720-like 157 253 IPR005508 GO:0003677
Gso1g0960 281 PANTHER DUF313 DOMAIN PROTEIN 2 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0960 Gso-Chr1 38885478 38886413 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0960 131 280 B3 DNA Binding Superfamily AT1G05930 20.530 5.07e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0960 - - gmx:102669231 501.901