Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0958 ATGAGGGACTTGAAAACTTTAAAGGAATTGGTGGCAAGCGTTACAGATTGGAAGTCGCTCGAGAAGATGTCTTGCAAACCCTTTAAGCCTTCCATTTTGCATTTGGCAATATCACAAGATGCGCCCCACTTATATAGCGAAGAACAGTTGATTCAATTAAAGAAATTAAGCAAACTACTTTCAAGCGCTGAATCGAAGCCAAATACAAATAAGACTGATAAGAGGGTGACCAAAAAAAGACAAATTGAAGAGAGACCTAAAGAAGAAAGAGTCATGCCAGCAACGATTAAAAAACCAAGAAAGATAATCTTGGAACAGAACGGACCATCACCAGATTTGCCGCCAAGAAGGATAATCTTGGAACATAGCGGGCCATCCCCAGATTTGCCAATGCAATTCAAGAACCGAGTAGCTGAGTTGAGTGGTCATGATCTTAAATATTTGATGCACAAGAGACTCTTCTGGTCAGACGTGAAGCCGAACAACAATCGTCTCTCCATGCCCATAAATGAAATTATGTGTGAATTTCTCACACAAGCGGAGATTGAAAAATTGGATGAAAGAAATGGAAGCAACCGAAAAGGACGGCTCGTTGGTCTGGAATTGACTGTGTTAGACCCATGTCTGAGAGAATTTACTTTACCATTGAAGAAGTGGAGCATGCAAAGGACTGACACCTACAACCTGGTAACAGATTGGAATAGTATCGTATCTACTAATGAGTTTGAAGAAGGCCAAGAGCTCCAAATTTGGTCTTTTAGGGTTGATAACAAGTTATATCTTCTCCTAAACAAACTGTGA 801 0.4032 MRDLKTLKELVASVTDWKSLEKMSCKPFKPSILHLAISQDAPHLYSEEQLIQLKKLSKLLSSAESKPNTNKTDKRVTKKRQIEERPKEERVMPATIKKPRKIILEQNGPSPDLPPRRIILEHSGPSPDLPMQFKNRVAELSGHDLKYLMHKRLFWSDVKPNNNRLSMPINEIMCEFLTQAEIEKLDERNGSNRKGRLVGLELTVLDPCLREFTLPLKKWSMQRTDTYNLVTDWNSIVSTNEFEEGQELQIWSFRVDNKLYLLLNKL* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0958 266 MobiDBLite consensus disorder prediction 61 90 - -
Gso1g0958 266 Gene3D - 139 265 IPR015300 -
Gso1g0958 266 MobiDBLite consensus disorder prediction 68 90 - -
Gso1g0958 266 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 2 264 IPR005508 GO:0003677
Gso1g0958 266 SUPERFAMILY DNA-binding pseudobarrel domain 148 261 IPR015300 -
Gso1g0958 266 Pfam B3 domain-containing protein At2g31720-like 142 238 IPR005508 GO:0003677
Gso1g0958 266 PANTHER DUF313 DOMAIN PROTEIN 2 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0958 Gso-Chr1 38860913 38861803 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0958 116 265 B3 DNA Binding Superfamily AT1G05930 22.368 2.77e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0958 - - gmx:102669231 512.686