Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0942 ATGTCAGTTTTCTTCTTCACTCTTCTAGTGCCCTTCTTAGGGTTTCTCTTTTTCTTCAAAACCACAAAACAACAGCAACGTAGTCATAATAACAACCATGCACCTCTCTCACACCCGATCATTGGATGCCTCGTCTCCTTCTACCAAAACCGCCACCGTCTCCTCGATTGGTACACCGAACAGTTAGCCAATTCCCCGACACAGACCATAGTCGTGCGCCGCCTCGGCGCACGACGCACGGTGGTGACGGCGAACCCCCGCAACGTGGAGTACATTCTAAAGACCAACTTCGGAAACTTCCCCAAAGGCAAACCCTTCACCGAAATCCTCGGCGACTTTCTCGGGTGCGGCATATTCAACGTGGACGGCGAGCTGTGGCACGCCCAGCGCAAGTTAGCGAGCCACGCGTTCAGCACGCGCTCCCTCAAGGACTTCATCGTGAAGACACTTCAAGAGGAGGTTCAACAAAGGCTTGTTCCATTACTTGAGCACGCCGCTCGTGAGAATCACGTGATCGATCTGCAAGACGTGTTGAGTAGGCTGACGTTCGATACTGTGTGCAAGGTGTCGCTGGGCTACGACCCGTGCTGTTTGGACCTCTCGAAGCCGCTGCCGCCTCTTTTGACGGCGTTCGATACCGCGTCGGAGGTCAGCGCCGCCCGCGGCTCTGCCCCGGTGTTTCTGGTGTGGAAGATGAAGAGAATGCTCAACGTTGGATCAGAGAAAGCATTGAAGGAAGCAGTGAAGCTAGTGCACGAGTCCGTGATGAATATTATAAAATTGAAGAAGGAGGAAATTAGGTTCAATAGAAAAAACGGCACGGATTTGCTTGATCGTTTGTTGGAGGCGTGTCACGAGGAAATTGTGGTGAGGGATATGGTTATAAGCATGATAATGGCGGGGAGGGACACCACTTCGGCCGCGATGACGTGGCTGTTTTGGTTGTTATCAAGACATAGGGAGCAAGAAGCATCGTTAGTGAAAGAGGTTTATGATGAAAATAACCAAAATCAGGGTTTGGGTTTGGATTATGAGTGTTTGAAGGAAATGAAGTTGTTGAAGGCATGTTTGTGTGAGTCCATGAGATTGTACCCACCAGTGGCATGGGACTCGAAGCATGCTGGTGGTGCTGACGTGTTACCCGATGGGACCCACGTGGAGAAAGGGGATAGGGTAACCTATTTTCCCTATGGAATGGGGAGAATGGAGGCTCTGTGGGGGGAGAATTGTTGCGAGTTTAAGCCACAACGTTGGTTTCATGAGGAGAATGTTGATAATGGGATTTTAAAGTGTGTGAATCCTTATATGTTTCCGGTGTTTCAGGCTGGGCCAAGAGTGTGTCTTGGGAGGGAAATGGCTTTTATTCAGATGAAGTATGTGGTGGCTTCTATTCTCAACCGCTTTGTGATTTCGCCTGTTTCTGATGAGCACCCTCGTTTTGTTCCTCTTCTAACGGCTCATATGGCCGGAGGGTTCATAGTGAGGGTCCACAAGAGAAATGGAACTGAAATTGAGAAGTAA 1521 0.4984 MSVFFFTLLVPFLGFLFFFKTTKQQQRSHNNNHAPLSHPIIGCLVSFYQNRHRLLDWYTEQLANSPTQTIVVRRLGARRTVVTANPRNVEYILKTNFGNFPKGKPFTEILGDFLGCGIFNVDGELWHAQRKLASHAFSTRSLKDFIVKTLQEEVQQRLVPLLEHAARENHVIDLQDVLSRLTFDTVCKVSLGYDPCCLDLSKPLPPLLTAFDTASEVSAARGSAPVFLVWKMKRMLNVGSEKALKEAVKLVHESVMNIIKLKKEEIRFNRKNGTDLLDRLLEACHEEIVVRDMVISMIMAGRDTTSAAMTWLFWLLSRHREQEASLVKEVYDENNQNQGLGLDYECLKEMKLLKACLCESMRLYPPVAWDSKHAGGADVLPDGTHVEKGDRVTYFPYGMGRMEALWGENCCEFKPQRWFHEENVDNGILKCVNPYMFPVFQAGPRVCLGREMAFIQMKYVVASILNRFVISPVSDEHPRFVPLLTAHMAGGFIVRVHKRNGTEIEK* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0942 506 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g0942 506 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g0942 506 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g0942 506 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g0942 506 Pfam Cytochrome P450 35 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g0942 506 PRINTS E-class P450 group IV signature 291 317 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g0942 506 PRINTS E-class P450 group IV signature 350 366 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g0942 506 PRINTS E-class P450 group IV signature 384 398 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g0942 506 PRINTS E-class P450 group IV signature 447 465 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g0942 506 PANTHER CYTOCHROME P450 15 497 - -
Gso1g0942 506 Gene3D Cytochrome P450 15 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g0942 506 SUPERFAMILY Cytochrome P450 29 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso1g0942 506 PANTHER CYTOCHROME P450 94B3 15 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0942 Gso-Chr1 37975441 37977237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0942 6 500 Cytochrome P450 AT3G48520 58.835 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0942 K20665 - gmx:100810294 996.497