Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0879 ATGGCCAAAGACTACGGAGAAGTTGAGTTGTTTGGTGTGGGGGGAAGCCCTTTTGCCAGAAGGGTGCAGATTGCCCTGGAACTGAAGGGAGTCCAATACACTTACTTTGAAGAAGATCTTAGGAACAAGAGTGATCTTCTTATCAAATACAACCCTATTCACAAGAAGGTACCTGTGCTTGTCCACAATGGAAGACCATTGGCTGAGTCCCTTGTGATCCTTGAATACATTGATGAGACATGGGAGAACCACCACCCCATCTTGCCTCAACAACCTTATGATAGAGCCTTGGCTCGATTCTGGTCAAGGTTCATTGATGACAAATGCATGCCTGCAATATCAAAGGCAGCATTTACTGCAGACAAGGAGGAACGTGACAAGGGCACTGAGGAATCACTCGAGTCTCTTCAAATTCTTGAGAATGTACTCAAACACAAGTTCTTTGGAGGTGAGACTACTATAGGCATAGTGGACATAGCCGCTGGCTTCATAGCTTTCTGGCTCCCTGCGATTGAAGAGGCTGTGGGGTTGAAATTGCTGACCAATGAGAAGTTTCCAAAACTCTACAAATGGGGTGAAGACTACACCAACCACCCTGTTGTGAAAAAGAATCTTCCCCAAAGAGATAGGGTTGTGGGGTTCTTCAAAGCTCGATATGCATCCATCACTGCTTCCAAATAG 681 0.4567 MAKDYGEVELFGVGGSPFARRVQIALELKGVQYTYFEEDLRNKSDLLIKYNPIHKKVPVLVHNGRPLAESLVILEYIDETWENHHPILPQQPYDRALARFWSRFIDDKCMPAISKAAFTADKEERDKGTEESLESLQILENVLKHKFFGGETTIGIVDIAAGFIAFWLPAIEEAVGLKLLTNEKFPKLYKWGEDYTNHPVVKKNLPQRDRVVGFFKARYASITASK* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0879 226 SFLD Glutathione Transferase (cytosolic) 6 224 IPR040079 -
Gso1g0879 226 CDD GST_N_Tau 8 81 - -
Gso1g0879 226 Gene3D Glutaredoxin 1 90 - -
Gso1g0879 226 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 222 IPR045073 -
Gso1g0879 226 CDD GST_C_Tau 92 218 IPR045074 GO:0004364|GO:0006749
Gso1g0879 226 SUPERFAMILY GST C-terminal domain-like 79 220 IPR036282 -
Gso1g0879 226 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Gso1g0879 226 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 1 222 - -
Gso1g0879 226 Pfam Glutathione S-transferase, N-terminal domain 8 79 IPR004045 -
Gso1g0879 226 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 212 IPR010987 -
Gso1g0879 226 Gene3D - 91 226 - -
Gso1g0879 226 Pfam Glutathione S-transferase, C-terminal domain 110 199 IPR004046 -
Gso1g0879 226 SFLD Main.3: Omega- and Tau-like 6 224 IPR045073 -
Gso1g0879 226 SUPERFAMILY Thioredoxin-like 8 110 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0879 Gso-Chr1 35740977 35742881 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0879 8 225 Glutathione S-transferase Gene Family AT3G09270 50.685 2.08e-80 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0879 K00799 - gmx:100306119 461.455