Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0877 ATGGCTTCAAATCATGAAGAAGTGATACTTTTGGGCAAGTGGGCCAGCCCATTTAGCAACAGAGTAGACCTTGCTCTCAAGCTCAAGGGAGTTCCCTACAAATACTCCGAGGAAGATCTTGCTAACAAGAGTGCTGATCTTCTCAGGTACAACCCCGTGCACAAGAAGGTTCCGGTTTTGGTCCACAATGGGAACCCATTACCCGAGTCACTTATCATTGTTGAATACATCGATGAGACATGGAAAAATAATCCCCTCTTGCCTCGAGACCCTTATGAGAGAGCCCTGGCTCGTTTCTGGTCTAAGACCTTAGATGACAAGATCTTGCCTGCTATATGGAATGCTTGCTGGAGTGATGAGAATGGACGTGAGAAAGCAGTGGAGGAAGCCTTGGAAGCATTGAAAATCCTGCAGGAAGCACTGAAAGACAAGAAATTTTTTGGAGGAGAGAGCATAGGATTGGTAGACATTGCTGCCAATTTCATTGGGTATTGGGTTGCCATATTGCAAGAGATTGCAGGGTTGGAGTTGCTCACCATTGAGAAATTTCCCAAGTTATATAAATGGAGTCAAGAGTTTATCAATCACCCTGTGATCAAGGAGGGCCTGCCTCCTAGAGATGAATTGTTTGCTTTCTTCCAAGCTTCTGCTAAAAAGTAG 660 0.4485 MASNHEEVILLGKWASPFSNRVDLALKLKGVPYKYSEEDLANKSADLLRYNPVHKKVPVLVHNGNPLPESLIIVEYIDETWKNNPLLPRDPYERALARFWSKTLDDKILPAIWNACWSDENGREKAVEEALEALKILQEALKDKKFFGGESIGLVDIAANFIGYWVAILQEIAGLELLTIEKFPKLYKWSQEFINHPVIKEGLPPRDELFAFFQASAKK* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0877 219 SFLD Main.3: Omega- and Tau-like 4 218 IPR045073 -
Gso1g0877 219 CDD GST_N_Tau 8 81 - -
Gso1g0877 219 SFLD Main (cytGST) 4 218 - -
Gso1g0877 219 CDD GST_C_Tau 91 215 IPR045074 GO:0004364|GO:0006749
Gso1g0877 219 Pfam Glutathione S-transferase, C-terminal domain 105 197 IPR004046 -
Gso1g0877 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 216 IPR045073 -
Gso1g0877 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Gso1g0877 219 Gene3D - 87 219 - -
Gso1g0877 219 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Gso1g0877 219 SUPERFAMILY GST C-terminal domain-like 79 217 IPR036282 -
Gso1g0877 219 Coils Coil 124 144 - -
Gso1g0877 219 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
Gso1g0877 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 213 IPR010987 -
Gso1g0877 219 Gene3D Glutaredoxin 1 86 - -
Gso1g0877 219 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0877 Gso-Chr1 35716710 35718783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0877 3 215 Glutathione S-transferase Gene Family AT3G09270 57.209 1.50e-90 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0877 K00799 - gmx:100527381 439.884