Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0864 ATGGCTGAGGGTTTTGAGGCTTACCATGTGCCACAACAAAGCAGAAGAGATAAGCTGAGGGTTGTGGCGACACAGAACCAACATGGTCTCGTTGAGCCCTCGTCTTTGCTTCCTTTGTACGACCCTTCTTCGTTTATATCTTCTGATTTGTTGACAAGCTTCCACAACGGCCAAAAACACAACTTGGGTTGTGGTATGAAGGAAGAACGTGCGAATTTGATGATGGGTTTTGCAGCAGCAGCAGGAGGGGGAGGAGTTATGAACAACGGCTCTTCTTCTTCGTGTTGTTCTTCTAACTCCTCTTCTGTTTCTTACTTGGATCCTGAATCGTCTTTGCCTTTGAACCAAGCCACAATTCAGGTTATTAACAATAGCAACAACAACAACATGTTTCTCTACCAAGCACAGAACCTGAGAGAGTTTGATCAGGGTTATAATAATAATAACAACAATAATAGTGAAATCATGGTGTTTAAGCCCGAGCCTTTGTCTTTGTCTCTGTCATCACACAACAACGGTGTGAATCTTCAGCGATATGGATCTGTGGTTTATGGTGATAAGGTTGGTGGGGTTGGTGGTGGTGGTGGTGGTGGTGTAGTGATTTATGGTGGTTCTGGTTTGAATGAGGTTTCAAGGTGCACAGTGCCAATGGGGCCATTTACTGGCTATGCTTCTATATTGAAGGGATCGAGGTTCTTGAAGCCTGCGCAGCAATTATTGGAAGAGTTATGTGATGTTGGTGGGGTTTGTGCTGAGAAGATTGTGGCTGATGCATCATTAATGGAGCCTATTCCTCCAGAGAGTTCAAGTGAAGATCCATTAGGGGATCATGGGGGTGATCAGGGTCGCAAAAAATCTAGGCTCTTAACTATGCTTGATGAGGTTTACAGGAGGTACAGGCAATACTATCAGCAGATGCAAGCGGTAGTAACTTCATTTGAGTATGTTTCTGGCCTGAGCAATGCAGCTCCCTATGCAAGTTTGGCTATAAAAGCTATGTCCAAACATTTTAGATGCTTGAAGAATGCAATTACTGATCAGATTCAGTTTGCCAATAAAGCTCATTTTCATATCAGCAACAGGAAAGATGAATCTCCAAGGTTTGGCAACAGTGATAGAGGCCCATATGGCCAAAGGCCTGGGTTTCTTGAGCACCAACCTGTTTGGCGGCCTCAAAGAGGACTCCCCGAGCGCGCTGTGACTGTCCTCAGAGCATGGTTGTTTGAGCACTTTCTGCACCCTTATCCCACTGATACTGACAAGCTAATGTTGGCTAAACAAACTGGTCTATCTCGTAGCCAGGTGTCTAATTGGTTCATTAATGCCAGAGTAAGGCTCTGGAAGCCAATGGTGGAAGAAATACATATGCTAGAAACACGGCAAGCTCCAAAGAATCTGCAGAAGGAAGAACATTGCACGAACAAGCCAAGTGATCATTTGCCTTCTGATAACTCCATTGTTTCTGAGAATCCATCTACTTCCACAGATAAATTTCAGGAAGCTCCTTACAAGCGTGCCATAAACGAGCTTCCTAACATACCAGTCAGGACTCAGGAACAGCTGAATCTTCCCTGCACAAGCAATCAGCCAGGGGGTGTTGGAGTGAGCATGGGTGGCAGTGCAAGCAATAGTGTGTCACTCACACTAGGCCTCTATCAAAACCATGGTATTGGTTTGGCTGAACCTTTCCCCTTGAATGCAGCGCAGCGATTTGGTGTTGCTCTTGAAACCAACAATGAAGGCTACGTTATGAGTGATTATGAGTCACAAAATAGGCATTTTGGAAGAGATGTCATTGGAGGACAACTGTTGCATGACTTTGTAGGCTGA 1830 0.4486 MAEGFEAYHVPQQSRRDKLRVVATQNQHGLVEPSSLLPLYDPSSFISSDLLTSFHNGQKHNLGCGMKEERANLMMGFAAAAGGGGVMNNGSSSSCCSSNSSSVSYLDPESSLPLNQATIQVINNSNNNNMFLYQAQNLREFDQGYNNNNNNNSEIMVFKPEPLSLSLSSHNNGVNLQRYGSVVYGDKVGGVGGGGGGGVVIYGGSGLNEVSRCTVPMGPFTGYASILKGSRFLKPAQQLLEELCDVGGVCAEKIVADASLMEPIPPESSSEDPLGDHGGDQGRKKSRLLTMLDEVYRRYRQYYQQMQAVVTSFEYVSGLSNAAPYASLAIKAMSKHFRCLKNAITDQIQFANKAHFHISNRKDESPRFGNSDRGPYGQRPGFLEHQPVWRPQRGLPERAVTVLRAWLFEHFLHPYPTDTDKLMLAKQTGLSRSQVSNWFINARVRLWKPMVEEIHMLETRQAPKNLQKEEHCTNKPSDHLPSDNSIVSENPSTSTDKFQEAPYKRAINELPNIPVRTQEQLNLPCTSNQPGGVGVSMGGSASNSVSLTLGLYQNHGIGLAEPFPLNAAQRFGVALETNNEGYVMSDYESQNRHFGRDVIGGQLLHDFVG* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0864 609 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 18 585 - -
Gso1g0864 609 MobiDBLite consensus disorder prediction 466 497 - -
Gso1g0864 609 CDD homeodomain 389 450 IPR001356 GO:0003677
Gso1g0864 609 Pfam Homeobox KN domain 406 445 IPR008422 GO:0003677|GO:0006355
Gso1g0864 609 SMART HOX_1 389 453 IPR001356 GO:0003677
Gso1g0864 609 MobiDBLite consensus disorder prediction 478 497 - -
Gso1g0864 609 MobiDBLite consensus disorder prediction 262 283 - -
Gso1g0864 609 MobiDBLite consensus disorder prediction 361 383 - -
Gso1g0864 609 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 18 585 - -
Gso1g0864 609 Pfam Associated with HOX 226 345 IPR006563 -
Gso1g0864 609 SUPERFAMILY Homeodomain-like 391 456 IPR009057 -
Gso1g0864 609 SMART prehox3 221 346 IPR006563 -
Gso1g0864 609 ProSiteProfiles 'Homeobox' domain profile. 386 449 IPR001356 GO:0003677
Gso1g0864 609 Gene3D - 392 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0864 Gso-Chr1 34938163 34945009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0864 154 609 Homeobox Transcription Factor Family AT5G02030 50.725 2.19e-124 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Gso1g0864 POX 2.1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0864 - - gmx:100805512 1082.78