Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0835 ATGGCTTGTTCCCGCATTCACTTCAACCTTAATCTCCCTTTCCCCTCCGATGCGGCACCAATTCCGTACACATGTCACTCTCCCTCTCGCCTCTCTCTTTCCCCTCTCTTCACATTCACAACACCAAAGATCGCTTATTCCAGTGCTCCGCGGCGCACGTGTGGTGCGGTGTGCTGTCAGATGACCATGGAGGAGAAGCCTCTCTCTGAGAACCAAATGCTCGTGTATGTGCCTCCTCATCCGTTGATCAAGCACTGGGTTTCAGTTTTGAGGAATGAGCAAACTCCTTGTCCCATCTTCAGAAATGCAATGGCTGAGTTGGGAAGGCTACTAATGTATGAAGCTTCAAGAGATTGGTTGCCAACTGTTTCTGGAGAGATTCAATCACCAATGGGTGTAGCCTCTGTGGAACTCATTGATCCCAGGGAGCCTGTGGCTGTAATTCCAATCCTGAGAGCAGGCCTTGCTCTAGCTGAACATGCATCATCGATCTTGCCTGCAATAAAAACATATCATTTAGGAATAAGCAGAGATGAGGAAACTCTTCAGCCAACTATATATTTGAACAAGTTACCCGAGAAATTTCCAGAAGGATCGAAAGTTTTTGTGGTTGATCCTATGCTGGCGACAGGTGGCACTATAGTGGCAGCTGTGAGCCTCTTAAAGGAACGTGGAGTTGGCAACAAGCAGATTAAAGTGATATCTGCTGTCTCTGCCCCTCCAGCTCTTCAAAAGCTGAGCGAACAGTTCCCTGGGCTTCATGTGTATACTGGAATAATTGACCCCGAAGTTAATGAAAAAGGGTTCATAATTCCTGGCCTTGGAGATGCTGGGGACCGCAGCTTTGGTACAGATACATGA 861 0.4762 MACSRIHFNLNLPFPSDAAPIPYTCHSPSRLSLSPLFTFTTPKIAYSSAPRRTCGAVCCQMTMEEKPLSENQMLVYVPPHPLIKHWVSVLRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVELIDPREPVAVIPILRAGLALAEHASSILPAIKTYHLGISRDEETLQPTIYLNKLPEKFPEGSKVFVVDPMLATGGTIVAAVSLLKERGVGNKQIKVISAVSAPPALQKLSEQFPGLHVYTGIIDPEVNEKGFIIPGLGDAGDRSFGTDT* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0835 286 Gene3D - 62 284 IPR029057 -
Gso1g0835 286 SUPERFAMILY PRTase-like 75 283 IPR029057 -
Gso1g0835 286 Pfam Uracil phosphoribosyltransferase 77 284 - -
Gso1g0835 286 TIGRFAM upp: uracil phosphoribosyltransferase 75 284 IPR005765 GO:0004845|GO:0006223
Gso1g0835 286 CDD PRTases_typeI 140 260 IPR000836 -
Gso1g0835 286 PANTHER URIDINE KINASE 41 281 - -
Gso1g0835 286 PANTHER URACIL PHOSPHORIBOSYLTRANSFERASE 2 41 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0835 Gso-Chr1 33173338 33181836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0835 47 286 PRT Gene Family AT3G53900 75.000 1.24e-133 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0835 K00761 - gmx:100797537 578.17