Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso1g0833 | ATGGCGCAGGCGGCGGGGCGGAGCAGGGTGGTGGGAGACTACGTGGTGGGGAAGCAAATCGGCGCGGGGTCGTTCTCCGTGGTGTGGCACGGGAGGCACAAGGTGCACGGCACCGAGGTGGCGATCAAGGAGATCGCCACGCTTCGCCTCAACAAGAAGTTGCAGGAGAGCCTCATGTCCGAGATTTTCATCTTGAAGCGGATTAACCACCCTAACATTATCTCTTTGCACGATATCATAAATCAGGTTCCTGGGAAGATACATCTTGTGTTAGAGTACTGTAAAGGAGGAGATCTTTCCTTGTACATTCAACGCCATGGAAGGGTACCAGAGGCAACTGCAAAACATTTTATGCAGCAGTTGGCTGCTGGTCTACAAGTTCTTCGGGACAATAACCTTATTCATCGAGACCTGAAACCACAGAACCTTCTTCTCTCCCGAAATGATGAGAAGTCAGTGCTGAAGATTGCTGACTTTGGATTTGCAAGATCTTTGCAACCTAGGGGGCTTGCTGAAACCTTGTGTGGTTCACCACTCTACATGGCTCCAGAAATCATGCAACTACAGAAGTATGATGCGAAGGCAGATCTCTGGAGTGTTGGTGCAATCTTATTTCAGCTTGTTACAGGAAGAACACCTTTCACTGGAAACAATCAAATACAGTTACTACAAAATATTATGAAATCAACAGAATTGCAGTTTCCGTCTGATAGCCCAAGTCTGAGTTTTGAATGCAAAGATTTGTGTCAGAAAATGCTACGTCGGAATCCAGTGGAACGTCTAACTTTTGAAGAATTCTTTAACCACCCTTTCCTTGCTCAGAAGCAAACAGAACGGGATGAGTCATTGAGGAATAGAAGTTCTTCAAGGATGGATGGTGGGTTTTGTTCTACAGTGTCTGATTTGAGAAGAACCGAGGAAAATTATCAAGAAGATTGTTTGCCTTTCATGTTAGATGACGACTCTAGTGGCCCCGAGGGGAGTTCATCCTTTTCAAGGAAGAAGTCCTCAATGAAGTCGACCTATGGATTTGATCTAAATGCTAAACTAGATAAAGCAGAGTCATCATCTCCTATTTCAGGATTTGGTAGTATGACACAAAGATCTGAAAACACTACTAAAAGATTGGACAACCATACAATTTCAAGAAATCTCACTGATCCTCTAGAATCTCCAGAGCAGCTTTTCGCAAGTCCTTATCCAAAAGTTATGGATTCGCTGGAGAATATTGATCAAGAATATGTTCTGGTGTCTGGCCCCACTATAGATGTTTCATCTTTGTCAGTGGGTGCTTCAAGGCCCATCCATACCCCAAGTCGGTCAGGTAGTTTACCCCAAGAGTCTTCTAGTACAATCACAAGACTAAGTGCTCCAATGCCAATAGTTGGTGTACCTACCAATAGTGTATGCCAAATTGGAAGTTCAGGAAGTCAGGACTCTGCTCCTGGGACATCACTTGGATCAATGGATACAGGTGATGAACAACCATCTGCTCACTGCATGACAAGGGTGAAATCATTGCAACAGTGTGCATCTTCCATCACAGAATTAGTTAATGAAAAGATGGAGGCAGGAAAGCATCTAGAAGCATTTTCTATTCAGCTTGTAATTCTTGCAATCTGGAAGCAAGCACTTCACATATGCCATACACAAGCTGCCTCAGCCATGGAAGGAAGTCCAAATCAAGAAACTTCAAGATATAGAAGGAGCACCAGTAGGAAGCATGGTAGTCCTGATTCTGAAGAATGCCTTGATGGAAACACCCTAGGGCCAAAGGATATATTATCTCAAATTGAAAGTGAATTTTTGAGGGAATTTGAGCATGCTGAAGAACTTGCCAAGACCATTGAGCCTGGAAACACAGAGATGCCAGATGCAATGGAGACAATATTTCAATCCGCCCTTGCTTTTGGAAGACATGGGGGTGTAGAAGAGCTCATGGGTGAAATGGAAAGTGCAGCTGCATTGTATTCAAAAGCTGTCCGTCTGTTAGTTTTCCTTCTAGTGGAAGGACCATCCCTGATTCTTAATCCTCCATTTTCACTGACAAACTCGGACCGTTACAGGCTTCGGAATTACATTGATATTCTTAATAACAGGCAAGGTTATTCAAGGTCCCAACGAATGACACTACTGAAATGTGAAGACTGTCAAGGTATCCTTAAGGAAAAGTTTTAG | 2178 | 0.438 | MAQAAGRSRVVGDYVVGKQIGAGSFSVVWHGRHKVHGTEVAIKEIATLRLNKKLQESLMSEIFILKRINHPNIISLHDIINQVPGKIHLVLEYCKGGDLSLYIQRHGRVPEATAKHFMQQLAAGLQVLRDNNLIHRDLKPQNLLLSRNDEKSVLKIADFGFARSLQPRGLAETLCGSPLYMAPEIMQLQKYDAKADLWSVGAILFQLVTGRTPFTGNNQIQLLQNIMKSTELQFPSDSPSLSFECKDLCQKMLRRNPVERLTFEEFFNHPFLAQKQTERDESLRNRSSSRMDGGFCSTVSDLRRTEENYQEDCLPFMLDDDSSGPEGSSSFSRKKSSMKSTYGFDLNAKLDKAESSSPISGFGSMTQRSENTTKRLDNHTISRNLTDPLESPEQLFASPYPKVMDSLENIDQEYVLVSGPTIDVSSLSVGASRPIHTPSRSGSLPQESSSTITRLSAPMPIVGVPTNSVCQIGSSGSQDSAPGTSLGSMDTGDEQPSAHCMTRVKSLQQCASSITELVNEKMEAGKHLEAFSIQLVILAIWKQALHICHTQAASAMEGSPNQETSRYRRSTSRKHGSPDSEECLDGNTLGPKDILSQIESEFLREFEHAEELAKTIEPGNTEMPDAMETIFQSALAFGRHGGVEELMGEMESAAALYSKAVRLLVFLLVEGPSLILNPPFSLTNSDRYRLRNYIDILNNRQGYSRSQRMTLLKCEDCQGILKEKF* | 726 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso1g0833 | 725 | Gene3D | Transferase(Phosphotransferase) domain 1 | 5 | 322 | - | - | |
Gso1g0833 | 725 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 133 | 145 | IPR008271 | GO:0004672|GO:0006468 | |
Gso1g0833 | 725 | MobiDBLite | consensus disorder prediction | 431 | 451 | - | - | |
Gso1g0833 | 725 | ProSiteProfiles | Protein kinase domain profile. | 14 | 272 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso1g0833 | 725 | MobiDBLite | consensus disorder prediction | 553 | 590 | - | - | |
Gso1g0833 | 725 | MobiDBLite | consensus disorder prediction | 315 | 336 | - | - | |
Gso1g0833 | 725 | MobiDBLite | consensus disorder prediction | 567 | 581 | - | - | |
Gso1g0833 | 725 | MobiDBLite | consensus disorder prediction | 468 | 492 | - | - | |
Gso1g0833 | 725 | MobiDBLite | consensus disorder prediction | 354 | 393 | - | - | |
Gso1g0833 | 725 | MobiDBLite | consensus disorder prediction | 468 | 498 | - | - | |
Gso1g0833 | 725 | PANTHER | SERINE/THREONINE-PROTEIN KINASE ATG1C-LIKE | 6 | 701 | - | - | |
Gso1g0833 | 725 | SMART | serkin_6 | 14 | 272 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso1g0833 | 725 | SUPERFAMILY | Protein kinase-like (PK-like) | 10 | 428 | IPR011009 | - | |
Gso1g0833 | 725 | ProSitePatterns | Protein kinases ATP-binding region signature. | 20 | 43 | IPR017441 | GO:0005524 | |
Gso1g0833 | 725 | MobiDBLite | consensus disorder prediction | 277 | 297 | - | - | |
Gso1g0833 | 725 | PANTHER | SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED | 6 | 701 | IPR045269 | GO:0004674|GO:0006914 | |
Gso1g0833 | 725 | MobiDBLite | consensus disorder prediction | 354 | 371 | - | - | |
Gso1g0833 | 725 | CDD | STKc_ATG1_ULK_like | 20 | 271 | - | - | |
Gso1g0833 | 725 | Pfam | Protein kinase domain | 14 | 272 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso1g0833 | Gso-Chr1 | 33080301 | 33090152 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso1g0833 | 10 | 274 | CBL-interacting serine-threonine protein kinases | AT2G30360 | 36.900 | 2.36e-52 | 186 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | Group-Pl-3 | Gso1g0833 | Pkinase | 1e-70 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso1g0833 | K08269 | - | gmx:100789255 | 1420.99 |