Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0833 ATGGCGCAGGCGGCGGGGCGGAGCAGGGTGGTGGGAGACTACGTGGTGGGGAAGCAAATCGGCGCGGGGTCGTTCTCCGTGGTGTGGCACGGGAGGCACAAGGTGCACGGCACCGAGGTGGCGATCAAGGAGATCGCCACGCTTCGCCTCAACAAGAAGTTGCAGGAGAGCCTCATGTCCGAGATTTTCATCTTGAAGCGGATTAACCACCCTAACATTATCTCTTTGCACGATATCATAAATCAGGTTCCTGGGAAGATACATCTTGTGTTAGAGTACTGTAAAGGAGGAGATCTTTCCTTGTACATTCAACGCCATGGAAGGGTACCAGAGGCAACTGCAAAACATTTTATGCAGCAGTTGGCTGCTGGTCTACAAGTTCTTCGGGACAATAACCTTATTCATCGAGACCTGAAACCACAGAACCTTCTTCTCTCCCGAAATGATGAGAAGTCAGTGCTGAAGATTGCTGACTTTGGATTTGCAAGATCTTTGCAACCTAGGGGGCTTGCTGAAACCTTGTGTGGTTCACCACTCTACATGGCTCCAGAAATCATGCAACTACAGAAGTATGATGCGAAGGCAGATCTCTGGAGTGTTGGTGCAATCTTATTTCAGCTTGTTACAGGAAGAACACCTTTCACTGGAAACAATCAAATACAGTTACTACAAAATATTATGAAATCAACAGAATTGCAGTTTCCGTCTGATAGCCCAAGTCTGAGTTTTGAATGCAAAGATTTGTGTCAGAAAATGCTACGTCGGAATCCAGTGGAACGTCTAACTTTTGAAGAATTCTTTAACCACCCTTTCCTTGCTCAGAAGCAAACAGAACGGGATGAGTCATTGAGGAATAGAAGTTCTTCAAGGATGGATGGTGGGTTTTGTTCTACAGTGTCTGATTTGAGAAGAACCGAGGAAAATTATCAAGAAGATTGTTTGCCTTTCATGTTAGATGACGACTCTAGTGGCCCCGAGGGGAGTTCATCCTTTTCAAGGAAGAAGTCCTCAATGAAGTCGACCTATGGATTTGATCTAAATGCTAAACTAGATAAAGCAGAGTCATCATCTCCTATTTCAGGATTTGGTAGTATGACACAAAGATCTGAAAACACTACTAAAAGATTGGACAACCATACAATTTCAAGAAATCTCACTGATCCTCTAGAATCTCCAGAGCAGCTTTTCGCAAGTCCTTATCCAAAAGTTATGGATTCGCTGGAGAATATTGATCAAGAATATGTTCTGGTGTCTGGCCCCACTATAGATGTTTCATCTTTGTCAGTGGGTGCTTCAAGGCCCATCCATACCCCAAGTCGGTCAGGTAGTTTACCCCAAGAGTCTTCTAGTACAATCACAAGACTAAGTGCTCCAATGCCAATAGTTGGTGTACCTACCAATAGTGTATGCCAAATTGGAAGTTCAGGAAGTCAGGACTCTGCTCCTGGGACATCACTTGGATCAATGGATACAGGTGATGAACAACCATCTGCTCACTGCATGACAAGGGTGAAATCATTGCAACAGTGTGCATCTTCCATCACAGAATTAGTTAATGAAAAGATGGAGGCAGGAAAGCATCTAGAAGCATTTTCTATTCAGCTTGTAATTCTTGCAATCTGGAAGCAAGCACTTCACATATGCCATACACAAGCTGCCTCAGCCATGGAAGGAAGTCCAAATCAAGAAACTTCAAGATATAGAAGGAGCACCAGTAGGAAGCATGGTAGTCCTGATTCTGAAGAATGCCTTGATGGAAACACCCTAGGGCCAAAGGATATATTATCTCAAATTGAAAGTGAATTTTTGAGGGAATTTGAGCATGCTGAAGAACTTGCCAAGACCATTGAGCCTGGAAACACAGAGATGCCAGATGCAATGGAGACAATATTTCAATCCGCCCTTGCTTTTGGAAGACATGGGGGTGTAGAAGAGCTCATGGGTGAAATGGAAAGTGCAGCTGCATTGTATTCAAAAGCTGTCCGTCTGTTAGTTTTCCTTCTAGTGGAAGGACCATCCCTGATTCTTAATCCTCCATTTTCACTGACAAACTCGGACCGTTACAGGCTTCGGAATTACATTGATATTCTTAATAACAGGCAAGGTTATTCAAGGTCCCAACGAATGACACTACTGAAATGTGAAGACTGTCAAGGTATCCTTAAGGAAAAGTTTTAG 2178 0.438 MAQAAGRSRVVGDYVVGKQIGAGSFSVVWHGRHKVHGTEVAIKEIATLRLNKKLQESLMSEIFILKRINHPNIISLHDIINQVPGKIHLVLEYCKGGDLSLYIQRHGRVPEATAKHFMQQLAAGLQVLRDNNLIHRDLKPQNLLLSRNDEKSVLKIADFGFARSLQPRGLAETLCGSPLYMAPEIMQLQKYDAKADLWSVGAILFQLVTGRTPFTGNNQIQLLQNIMKSTELQFPSDSPSLSFECKDLCQKMLRRNPVERLTFEEFFNHPFLAQKQTERDESLRNRSSSRMDGGFCSTVSDLRRTEENYQEDCLPFMLDDDSSGPEGSSSFSRKKSSMKSTYGFDLNAKLDKAESSSPISGFGSMTQRSENTTKRLDNHTISRNLTDPLESPEQLFASPYPKVMDSLENIDQEYVLVSGPTIDVSSLSVGASRPIHTPSRSGSLPQESSSTITRLSAPMPIVGVPTNSVCQIGSSGSQDSAPGTSLGSMDTGDEQPSAHCMTRVKSLQQCASSITELVNEKMEAGKHLEAFSIQLVILAIWKQALHICHTQAASAMEGSPNQETSRYRRSTSRKHGSPDSEECLDGNTLGPKDILSQIESEFLREFEHAEELAKTIEPGNTEMPDAMETIFQSALAFGRHGGVEELMGEMESAAALYSKAVRLLVFLLVEGPSLILNPPFSLTNSDRYRLRNYIDILNNRQGYSRSQRMTLLKCEDCQGILKEKF* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0833 725 Gene3D Transferase(Phosphotransferase) domain 1 5 322 - -
Gso1g0833 725 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Gso1g0833 725 MobiDBLite consensus disorder prediction 431 451 - -
Gso1g0833 725 ProSiteProfiles Protein kinase domain profile. 14 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso1g0833 725 MobiDBLite consensus disorder prediction 553 590 - -
Gso1g0833 725 MobiDBLite consensus disorder prediction 315 336 - -
Gso1g0833 725 MobiDBLite consensus disorder prediction 567 581 - -
Gso1g0833 725 MobiDBLite consensus disorder prediction 468 492 - -
Gso1g0833 725 MobiDBLite consensus disorder prediction 354 393 - -
Gso1g0833 725 MobiDBLite consensus disorder prediction 468 498 - -
Gso1g0833 725 PANTHER SERINE/THREONINE-PROTEIN KINASE ATG1C-LIKE 6 701 - -
Gso1g0833 725 SMART serkin_6 14 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso1g0833 725 SUPERFAMILY Protein kinase-like (PK-like) 10 428 IPR011009 -
Gso1g0833 725 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Gso1g0833 725 MobiDBLite consensus disorder prediction 277 297 - -
Gso1g0833 725 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 6 701 IPR045269 GO:0004674|GO:0006914
Gso1g0833 725 MobiDBLite consensus disorder prediction 354 371 - -
Gso1g0833 725 CDD STKc_ATG1_ULK_like 20 271 - -
Gso1g0833 725 Pfam Protein kinase domain 14 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0833 Gso-Chr1 33080301 33090152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0833 10 274 CBL-interacting serine-threonine protein kinases AT2G30360 36.900 2.36e-52 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Gso1g0833 Pkinase 1e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0833 K08269 - gmx:100789255 1420.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0833 1 33080301 33090152 Gso1g0833 1 33080301 33090152 ECH