Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0829 ATGGGTGCTTGTTGGAGCAGTAGGATTAAGGCCGTGAGTCCTTCCAATACAGGGTTCACTTCTAGAAGTGTTAGCAGAGATGGCCATGACATCCAGTCAAGTAGCAGGAACTCATCAGCTTCCATACCCATGACCCCTCGGAGCGAGGGAGAGATCTTACAATTTTCCAATTTAAAAAGCTACAGCTACAATGAGCTAAAAATGGCCACAAAAAATTTCTGCCCAGATAGTGTCCTAGGAGAGGGTGGATTTGGTTCAGTTTTCAAGGGCTGGATTGATGAACATTCGCTTGCTGTTACCAGACCCGGAACAGGCATGGTTATTGCCGTGAAGAAACTTAACCAAGACAGTTTCCAGGGTCACAAGGAATGGTTGGCTGAAATCAACTATCTTGGCCAACTGCAAAATCCTAATCTTGTGAAGTTGATAGGCTACTGCTTAGAGGATCAGCACCGGCTTCTAGTTTATGAGTATATGCCCAAAGGCAGTGTGGAGAATCATCTGTTCAGAAGAGGATCTCATTTTCAGCAGCTTTCTTGGACTTTGAGATTGAAAATATCCCTTGGGGCTGCAAGGGGTCTTGCTTTTCTCCATAGCACAGAAACTAAAGTCATATACCGTGACTTTAAGACTTCCAATATCCTTCTTGATACTAACTATAATGCCAAACTTTCTGATTTTGGGCTGGCCAGAGATGGACCAACTGGTGATAAAAGCCATGTTTCTACTAGGGTCATGGGAACCCATGGATATGCAGCACCAGAGTATCTAGCAACAGGTCACCTCACTGCCAAGAGTGATGTCTATAGTTTTGGAGTAGTTCTTTTGGAAATGTTATCAGGAAGACGAGCCATAGACAAGAACCGACCATCTGGAGAGCAATGCCTAGTTGAATGGGCAAAGCCTTACCTTTCTAACAAACGCAGAGTTTTTCGTGTGATGGATAGTCGTCTTGAAGGACAGTATTCCCTTACCCAAGCTCAAAGGGCAGCCACCCTTGCTTTTCAATGTCTTTCTGTAGAGCCCAAATACAGGCCAAATATGGATGAGGTGGTGAAAGCATTGGAGCAGCTACGCGAATCAAATGATAAGGTGAAAAATGGTGATCATAAAAAGTGTAGAGTTAGTGGCTCTGGCCTTGGCCACCCCAATGGACTCCCTGCGTCTACCAGCAAAGGAAGTATAGATGCTGCTAAAAAGTTTAATTATCCTAGGCCCTCTGCTTCTCTCCTTTATTCTTAA 1242 0.4436 MGACWSSRIKAVSPSNTGFTSRSVSRDGHDIQSSSRNSSASIPMTPRSEGEILQFSNLKSYSYNELKMATKNFCPDSVLGEGGFGSVFKGWIDEHSLAVTRPGTGMVIAVKKLNQDSFQGHKEWLAEINYLGQLQNPNLVKLIGYCLEDQHRLLVYEYMPKGSVENHLFRRGSHFQQLSWTLRLKISLGAARGLAFLHSTETKVIYRDFKTSNILLDTNYNAKLSDFGLARDGPTGDKSHVSTRVMGTHGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAIDKNRPSGEQCLVEWAKPYLSNKRRVFRVMDSRLEGQYSLTQAQRAATLAFQCLSVEPKYRPNMDEVVKALEQLRESNDKVKNGDHKKCRVSGSGLGHPNGLPASTSKGSIDAAKKFNYPRPSASLLYS* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0829 413 MobiDBLite consensus disorder prediction 13 47 - -
Gso1g0829 413 MobiDBLite consensus disorder prediction 362 376 - -
Gso1g0829 413 Gene3D Phosphorylase Kinase; domain 1 49 158 - -
Gso1g0829 413 ProSitePatterns Protein kinases ATP-binding region signature. 79 112 IPR017441 GO:0005524
Gso1g0829 413 Coils Coil 348 368 - -
Gso1g0829 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Gso1g0829 413 Gene3D Transferase(Phosphotransferase) domain 1 159 378 - -
Gso1g0829 413 MobiDBLite consensus disorder prediction 362 399 - -
Gso1g0829 413 SUPERFAMILY Protein kinase-like (PK-like) 40 355 IPR011009 -
Gso1g0829 413 ProSiteProfiles Protein kinase domain profile. 73 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso1g0829 413 PANTHER KINASE 1B 22 392 - -
Gso1g0829 413 PANTHER OS01G0588500 PROTEIN-RELATED 22 392 - -
Gso1g0829 413 CDD STKc_IRAK 79 358 - -
Gso1g0829 413 Pfam Protein kinase domain 77 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0829 Gso-Chr1 32659934 32663546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0829 32 355 Glycoside Hydrolase AT3G07070 46.269 7.27e-100 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gso1g0829 Pkinase 5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0829 - - gmx:100795058 826.239