Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0807 ATGGCGTCCGATGGCTTCACCGACAAGAACACCGTGTTCAGAAAGCTCAAGGCGAAGTCCGAAAATAAGATGTGTTTCGATTGCAATGCGAAGAACCCTACCTGGGCGTCCGTCACGTATGGGATCTTCCTCTGCATCGATTGCTCCGCCGTTCACCGCAGTCTCGGCGTGCACATCAGCTTCGTGAGGTCTACAAATTTAGACTCATGGAGTCCTGAGCAACTAAAAACGATGAGCTTTGGAGGAAACAATCGTGCACATGGTTTCTTTAAGCAACATGGTTGGACTGATGGTGGTAAAATAGAGGCTAAATACACATCTAGAGCTGCAGATTTGTATAGGCAAATTCTTTCAAAGGAAGTAGCAAAAAGTATGGCTGAGGATGGAGGCTTGCCTTCATCACCTGTTGCTTCTCAGTCTGCCCAGGGGGTTAATGGGCTTCCAGAAGTCAAGACCAATGAAGTGCCAAAAGAAAACACTCTGGAGAAGCCAGAAAAGCCTGAGAGCACTTCTTCACCTAGAGCTTCACATTCAGTAATTTCAGGTACTGTTAAGAAACCTATCGGTGCTAAAAAAGCAGTGAAGAGTGGGGGGCTTGGTGCTCGTAAACTCACTAAAAAGCCAAGTGAGTCTCTCTATGAGCAGAAGCCTGAGGAACCCCCTGCTCCAGTTCCATCTTCAACAAACAGTATGCCTGCTGGGCCATCTCCGACATCTCGGTTTGAATATGTAGAAAATGTCCAATCATCTGACTTGAACACTGGAGGTTCTCATGTTCTTAGTCATGTGTCTCCACCAAAGTCATCAAGCTTCTTTGCAGACTTTGGAATGGATGGTGGCTTTCCAAAGAAATCTGGGCCAAGTTCCTCCAAAGTGCAAATTCAGGAAACTGACGAAGCAAGAAGGAAGTTCTCAAATGCTAAATCTATTTCTTCATCTCAATTTTTTGGAGATCAGAACAAAGCTGCAGATGTGGATTCTCAAGCTACTTTGTCTAAGTTTTCGGGTTCAAGTGCCATCTCCAGCGCTGATCTTTTTGGTGACTCAAGAGACAACAACATCGATCTTACTGCTGGTGACCTCATCAATCGATTATCTTTCCAGGCACAACAGGATCTCTCTTCCCTTAAGAACATTGCAGGAGAGACTGGAAAGAAGCTCAGCTCACTGGCCTCCACATTGATGACAGATCTTCAGGACCGAATCCTCTAA 1212 0.4563 MASDGFTDKNTVFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSPEQLKTMSFGGNNRAHGFFKQHGWTDGGKIEAKYTSRAADLYRQILSKEVAKSMAEDGGLPSSPVASQSAQGVNGLPEVKTNEVPKENTLEKPEKPESTSSPRASHSVISGTVKKPIGAKKAVKSGGLGARKLTKKPSESLYEQKPEEPPAPVPSSTNSMPAGPSPTSRFEYVENVQSSDLNTGGSHVLSHVSPPKSSSFFADFGMDGGFPKKSGPSSSKVQIQETDEARRKFSNAKSISSSQFFGDQNKAADVDSQATLSKFSGSSAISSADLFGDSRDNNIDLTAGDLINRLSFQAQQDLSSLKNIAGETGKKLSSLASTLMTDLQDRIL* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0807 403 MobiDBLite consensus disorder prediction 133 147 - -
Gso1g0807 403 MobiDBLite consensus disorder prediction 126 264 - -
Gso1g0807 403 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD9-RELATED 1 403 - -
Gso1g0807 403 Pfam Putative GTPase activating protein for Arf 11 100 IPR001164 GO:0005096
Gso1g0807 403 PANTHER ADP-RIBOSYLATION FACTOR GTPASE ACTIVATING PROTEIN 3, ISOFORM H-RELATED 1 403 - -
Gso1g0807 403 PRINTS HIV Rev interacting protein signature 22 41 IPR001164 GO:0005096
Gso1g0807 403 PRINTS HIV Rev interacting protein signature 41 58 IPR001164 GO:0005096
Gso1g0807 403 PRINTS HIV Rev interacting protein signature 62 83 IPR001164 GO:0005096
Gso1g0807 403 MobiDBLite consensus disorder prediction 231 264 - -
Gso1g0807 403 CDD ArfGap_ArfGap2_3_like 8 123 - -
Gso1g0807 403 ProSiteProfiles ARF GTPase-activating proteins domain profile. 10 128 IPR001164 GO:0005096
Gso1g0807 403 SUPERFAMILY ArfGap/RecO-like zinc finger 11 125 IPR037278 -
Gso1g0807 403 Gene3D Arf GTPase activating protein 2 135 IPR038508 -
Gso1g0807 403 MobiDBLite consensus disorder prediction 155 170 - -
Gso1g0807 403 SMART arf_gap_3 10 126 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0807 Gso-Chr1 30860907 30866838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0807 13 91 C2H2 Transcription Factor Family AT4G21160 46.250 7.21e-20 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0807 K12493 K11855 gmx:100789796 786.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0807 1 30860907 30866838 Gso1g0807 1 30860907 30866838 ECH