Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0789 ATGTCCTTCAATCAATCAAAGTCCGATAAGAGCGACGCTGTGTACCGAAAATCCGGGCGATCCGGCAGCTTCAATCAGCAGCGCGGTCCCTTCGGCGGTGCGTACGGTAAGGGCGGCGGCGGCGGTGCCGGACCTTCTCCGTCGCTCTCCTCTAGCCGGAGTTTTAACAAGAAGTCTAATAATAATGCACAAGGTGGGCAATCTAGGGTAAACCCTACTCCGGTGAATTCGACCGAGTCTAATAGTACTTATGCAGCCCGGACTGTACCAAACGGTTCCTATGTACAGCCGCAGATTCATGGAGGATCGGATGCACCAATTACAAATGCAACTGCCAAGTCATCTGAACTGTTGGCTGCACAGAGGAGCTCCAGAGCTGTTCCAAAAGCTCCTACTTCTCAACCTCCCTCCATGAGTCCTGATCCAGCAGCTCCTACAACCCCTGCTAAGGCAGATGCATCTAAGGCATTCCCTTTCCAGTTTGGATCTATTAGTCCTGGCTTTATGAATGGGATGGCAATTCCTGCTCGCACAAGCTCTGCTCCTCCTAATATAGATGAACAGAGGCGTGATCAAGCTCGACATGATTCTCTTAGACCTGTACCCTCAATGCCAACACCTCCTGTTCCAAAGCAGCATCTGGTGAAGAAGGATACAGGTGTTGCTGACCAATCTAATGCTGGGGAGATTCATACTGGGATTAGGGCAAAAAAGGATACTCAAATGTCACCATTACCCCCAGCAAGCCAGATGCAGAAGCCTTCTGTCATTTCTTTATCTGGAATGTCAATGCCTATGCCATATCACCACCAGTCACAGGCATCTGTACACTTTGGTGGTCCTAATCCACAGATTCAGTCATCGGCACCTCTTCAGATGCCATTACCAATGCCTTTACCGATTGGAAGTGGAGCACAAGTGCAACAACAGGTTTTTGTTCCAAGCCTTCAACCTCATCCTATCCATCCTCAGGGAATCATGCATCAGGGCCAAAGCATGGGTTTCACTCCTCAAATTGGCCCTCAGTTGACCCATCAGTTAGGCAACATGGCTATTGGAATTAGCCCACAATATCCACCACAGCAAGGAGGAAAATTTGCTGCTCGTAAAACTACTCCTGTCAAGATAACTCACCCTGAGACACATGAAGAGCTAAGACTTGATAAAAGGACAGATGCATATTCAGATGGTGGGTCATCTGGTTCAAGGCATCATTCTGGCATGCCTTCTCAATCTCAGCCTGCCCAGCAATTTGCTGCTTCCCATCCTATTAATTACTATCCATCCAGTTCTTACAGTACCAATTCTCTCTTTTATCCAACTACCAGTTCTCTTCCATTAACAAGTAGCCAGATAACTCCTAACTCTCAGCCATCCAGATTTAATTATGCAGTGAACCATGGTCCACAAAATGCAAGTTTTATAAATTCATCATCTCATAGTTCTCTGCCTGTCAATAAAGCTGGCACTTCTATTCCTGGCAATGCTGAATCTCCTAATCCAGAAATTTTCCAGGATGTACATAATACAATCTTGTCTGCTCCTTCAGGAGTAACTTCTGTGTCTATTAAGCCAACTGGTGGATCTGGTGTTGTTGTGGACTCATCATTTTCCAATTCCAGTACTCAAAAGAGTGGATCTTCTAGTTCTTCATTAACATCTAGTGATGCTTTCGAAACAACTGAAATCACTTCACAACAGTCTAAGGTGTCCAGTGATTCATCAGTTTTGAGTTCATTACCAAGTTTATCTGCTGCATCTACCATGAAGCCTACATCAGCTTCCTTGTTACTTCCTGCATCTGCTGTGAGTGAAGATTCCATTTCAGTTCTGCCTAATAATGAAGGCGGAAAGAAGGAATCTCTTAGTAGGTCAAATTCTTTGAAGGATAACCAGAAGAAAATACAGAAGAAAGGCCAATCACAGCATCAGGTTGCTGTGCAATCTCCTTCTGTGGTTAATGTGCCTTTCCAAGCTGTTGACGGTGATATCCCTGATGAAGTTTCTGAAACTGTAGGAACTAAAACAAACCATTCTGCGGCAATTACCAGTGAAGATCTCTCCGCTGCTGCTTCAGACACGTTATCAGCTACCATTGAGAGCCTAACTTGTGCTGTTGAAATGAAAACTAATGATTCTACACAAGTTTCTGCTTGTGCTTCAGCTGAAGGACCTGTTACACAAGTGATGGATAATTTGAACAATCATAAGATTGCTGAGCTAGATGAATTGTCACACCAGGATAAACCCTTACAGCCAAATATTTTGGAAATGGGTGGTAAAACAGAAAATTTGTCTCTTCAAGGAAGTAAACAAAGTGTTAGTGATGGTGGAACAGAATTAAAACAACCTAAGAAAGGTACTGTGAAGTTAAGCACTGAGTTTGTAACCTTGAAAACCAAAGAATCTACCAGTTGTAGTGCAGAATGTGACACAACGGCTGATAATAACGGCATGTCTGTCTCTACCAAATTGGATTCCAAAGATGTTTGTTTAAATAGAAATGATAGTGTAGTTAGTAATGAAGCGGTTTCTTCAAATTCTGGCACATCAGATCAGCAGTCTGCTGATCTCCTAGAAGCAACTTCAAAACAGTGCAAGGATGATAGTGCAGAGAATGCTGGCAGTGTTTCAGTGTCTCTTCCAGCATCAGGTACCAAGGACAGACCAATTTCAGAGTCTAGTAAGGTGAAACCTACATCAAAGGGGAAAAAGAAACGAAAAGAGATTCTTCAGAAGGCCGATGCTGCTGGGTCAACATCTGATCTTTATAATGCATATAAGGGACCTGAGGAAAAGAAAGAAACTATTATAAGTTCAGAGAAAACAGAAAGTGGTTCTACTTCTGGAAATTTAGAGCGGTTGCCAACTGATACTGCTCAGCCAGATGCTGTAGCAAATGAGCAATCTAAGCAGAGTAAAGCTGAACTTGATGATTGGGAGGATGCTGCTGACATGTCTACACCTAAACTAGAAGTTTCAGATGAAACTGAACAGGTTAGTGATGGAAGTGCAATTACTGCCAAAAAGTACTCTCGAGATTTCCTTTTGAAATTTGCAGAGCAGTGCACTGATCTTCCTGAAGGGTTTGAAATCACAGCAGACATAGATGAGGCCTTGATGAGTGTTAATGTTAGTTCCCATGTAATTGAACGTGATTCTCATTCTACTGGAAGAATTATTGATAGGTCAGGTGGGATGTCTCGTCGTGGGAGTGGTGTTATTGAGGAAGACAAATGGAGTAAAGTTTCTAATGCATTTCATTCTGGTATGCGTTTGGATGGTGTAGGAGGTAATGCCGGATTTCGACCTGGTCAAGGAGGCAATTTTGGTGTTTTAAGGAATCCACGCACACAGACACCTCTGCAGTATGCTGGAGGGATTCTTTCTGGTCCAATGCAATCCATGGTAAATCAGGGAGGAATGCAAAGAAATAGCCCTGATGGAGAAAGGTGGCAGCGTGCTACTAGCTTCCAGCAGAGGGGTTTAATTCCATCTCCTTCTACTCCTCAAACTCCTTTACAGATGATGCACAAAGCTGAGAAGAAGTATGAGGTGGGTAAAGTGACAGATGAGGAACAGGCAAAGCAGAGGCAATTGAAGGGTATATTAAACAAGTTAACTCCTCAGAATTTTGAGAAACTTTTTGATCAGGTTAGAGCAGTTAATATTGACAATGTTGTCACTCTCAATGGTGTCATCTCACAAATCTTTGAGAAGGCCTTGATGGAGCCTACCTTCTGTGAAATGTATGCCAATTTCTGTTTTCATCTAGCAGCTGCGTTACCTGATCTCAGTCAAGACAATGAAAAGATAACTTTTAAGAGATTATTGTTAAACAAGTGCCAGGAAGAATTTGAGAGGGGTGAAAGAGAGCAAGAAGAAGCTAATAAGGTTGATGAGGGTGAGGTCAAGCTGTCTAATGGGGAAAGAGAAGAGAAACGTACCAAGGCAAGAAGACGTATGTTGGGTAATATCAGATTGATTGGAGAACTATATAAGAAGAAAATGTTGACAGAAAGGATAATGCATGAATGCATCAAGAAGTTATTGGGTCAGTATCAGGATCCGGATGAAGAAGATATTGAAGCTTTGTGCAAGCTGATGAGTACTATTGGGGAGATGATTGACCATCCCAAAGCCAAGGAACATATGGATGCGTATTTTGAAATGATGAGATCATTATCAAACAACATGAATTTATCTTCTAGGGTGAGGTTCATGTTGAAGGATGTCATTGATTTGAGAAAGAATAAATGGCAACAAAGAAGAAAAGTTGAAGGTCCAAAGAAGATTGAGGAGGTGCACAGAGATGCTTCTCAAGAGAGGCTGGCCCAAGCTAGTAGGCTGGGTCGTGGTCCAGGCAACAATCCACCTAGAAGAATCCCTATGGATTTTGGTCCAAGAGGGTCATCTATGTTATCTCCCAATGCTCAGATGGGTGGACTGCGTGGATTGCCTACTCAAGTTCGCGGGTATGGTTCTCAGGATGCTCGCATGGAAGACAGGCAAACTTATGAGGCTAGGACATTGTCAGTTCCCTTGCCTCAGAGACCTTTAGGTGATGAATCCATAACCTTGGGACCACAGGGTGGCCTTGCCAGAGGAATGTCCATTAGAGGTCCACCTGCAGTTTCAAGTTCAACTGGTCTTAATGGTTATAATAATTTGTCGGAGCGCACTTCATACAGCTCTAGGGAGGACCCTGCATCAAGATATACTCCAGATAGATTTGCTGGTTCGACTGCTTATGATCAATCTAGTGTTCAAGATCGTAATATGAATTATGGCAACAGGGACTTAAGAAATGCAAATAGGATTCTTGATAAACCTGTTGTAACTTCACCTGCCAGAGCACAAGGGACAGCAGCCTCCCAGAATATTTCTGCAGAGCGACTGCAGGACATGTCCATGGCAGCAATCAGAGAATACTATAGTGCTAGAGATGTGAATGAAGTTGTTCTATGCATCAAAGATCTGAACTACCCAGGCTTTCATCCTTCCATGGTTTCTCTCTGGGTCACAGACTCGTTTGAGAGAAAGGACACCGAGAGAAATCTTTTGGCCCAACTGCTTGTCAAGCTTGTGAAATCTCAGGATGGACCATTGGGTCAAGCCCAGCTCATCAAAGGGTTTGAATCTGTTCTCAGCACTTTGGAAGATGCGGTTAATGATGCCCCCAAAGCACCAGAGTTTCTTGGCCGCATTTTTGCCAAAGCTATAACAGAGCATGTAGTCTCTTTGAAAGAGATTGGGCGGTTAATACATGAGGGTGGAGAGGAACCGGGGAGCCTCTTAGAAGCTGGACTTGCAGCTGATGTTCTTGGAAGCACCTTGGAGGTAATAAAAATGGAGAAGGGTGATGCTGTTTTGAGTGAGATCTGCACGAGCTCCAACTTGCGGTTGGAGACCTTCCGGCCGCTGGAACCTCTTACATCAAGGAAGTTAGAGAAATTTATTTTAGGGGGATAG 5472 0.4362 MSFNQSKSDKSDAVYRKSGRSGSFNQQRGPFGGAYGKGGGGGAGPSPSLSSSRSFNKKSNNNAQGGQSRVNPTPVNSTESNSTYAARTVPNGSYVQPQIHGGSDAPITNATAKSSELLAAQRSSRAVPKAPTSQPPSMSPDPAAPTTPAKADASKAFPFQFGSISPGFMNGMAIPARTSSAPPNIDEQRRDQARHDSLRPVPSMPTPPVPKQHLVKKDTGVADQSNAGEIHTGIRAKKDTQMSPLPPASQMQKPSVISLSGMSMPMPYHHQSQASVHFGGPNPQIQSSAPLQMPLPMPLPIGSGAQVQQQVFVPSLQPHPIHPQGIMHQGQSMGFTPQIGPQLTHQLGNMAIGISPQYPPQQGGKFAARKTTPVKITHPETHEELRLDKRTDAYSDGGSSGSRHHSGMPSQSQPAQQFAASHPINYYPSSSYSTNSLFYPTTSSLPLTSSQITPNSQPSRFNYAVNHGPQNASFINSSSHSSLPVNKAGTSIPGNAESPNPEIFQDVHNTILSAPSGVTSVSIKPTGGSGVVVDSSFSNSSTQKSGSSSSSLTSSDAFETTEITSQQSKVSSDSSVLSSLPSLSAASTMKPTSASLLLPASAVSEDSISVLPNNEGGKKESLSRSNSLKDNQKKIQKKGQSQHQVAVQSPSVVNVPFQAVDGDIPDEVSETVGTKTNHSAAITSEDLSAAASDTLSATIESLTCAVEMKTNDSTQVSACASAEGPVTQVMDNLNNHKIAELDELSHQDKPLQPNILEMGGKTENLSLQGSKQSVSDGGTELKQPKKGTVKLSTEFVTLKTKESTSCSAECDTTADNNGMSVSTKLDSKDVCLNRNDSVVSNEAVSSNSGTSDQQSADLLEATSKQCKDDSAENAGSVSVSLPASGTKDRPISESSKVKPTSKGKKKRKEILQKADAAGSTSDLYNAYKGPEEKKETIISSEKTESGSTSGNLERLPTDTAQPDAVANEQSKQSKAELDDWEDAADMSTPKLEVSDETEQVSDGSAITAKKYSRDFLLKFAEQCTDLPEGFEITADIDEALMSVNVSSHVIERDSHSTGRIIDRSGGMSRRGSGVIEEDKWSKVSNAFHSGMRLDGVGGNAGFRPGQGGNFGVLRNPRTQTPLQYAGGILSGPMQSMVNQGGMQRNSPDGERWQRATSFQQRGLIPSPSTPQTPLQMMHKAEKKYEVGKVTDEEQAKQRQLKGILNKLTPQNFEKLFDQVRAVNIDNVVTLNGVISQIFEKALMEPTFCEMYANFCFHLAAALPDLSQDNEKITFKRLLLNKCQEEFERGEREQEEANKVDEGEVKLSNGEREEKRTKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQYQDPDEEDIEALCKLMSTIGEMIDHPKAKEHMDAYFEMMRSLSNNMNLSSRVRFMLKDVIDLRKNKWQQRRKVEGPKKIEEVHRDASQERLAQASRLGRGPGNNPPRRIPMDFGPRGSSMLSPNAQMGGLRGLPTQVRGYGSQDARMEDRQTYEARTLSVPLPQRPLGDESITLGPQGGLARGMSIRGPPAVSSSTGLNGYNNLSERTSYSSREDPASRYTPDRFAGSTAYDQSSVQDRNMNYGNRDLRNANRILDKPVVTSPARAQGTAASQNISAERLQDMSMAAIREYYSARDVNEVVLCIKDLNYPGFHPSMVSLWVTDSFERKDTERNLLAQLLVKLVKSQDGPLGQAQLIKGFESVLSTLEDAVNDAPKAPEFLGRIFAKAITEHVVSLKEIGRLIHEGGEEPGSLLEAGLAADVLGSTLEVIKMEKGDAVLSEICTSSNLRLETFRPLEPLTSRKLEKFILGG* 1824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0789 1823 SUPERFAMILY ARM repeat 1627 1815 IPR016024 -
Gso1g0789 1823 MobiDBLite consensus disorder prediction 1424 1443 - -
Gso1g0789 1823 Gene3D - 1624 1821 - -
Gso1g0789 1823 MobiDBLite consensus disorder prediction 1289 1316 - -
Gso1g0789 1823 MobiDBLite consensus disorder prediction 534 555 - -
Gso1g0789 1823 SUPERFAMILY ARM repeat 1191 1421 IPR016024 -
Gso1g0789 1823 SMART ma3_7 1633 1747 IPR003891 -
Gso1g0789 1823 MobiDBLite consensus disorder prediction 1542 1569 - -
Gso1g0789 1823 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 124 1809 - -
Gso1g0789 1823 MobiDBLite consensus disorder prediction 622 637 - -
Gso1g0789 1823 ProSiteProfiles MI domain profile. 1632 1756 IPR003891 -
Gso1g0789 1823 MobiDBLite consensus disorder prediction 941 971 - -
Gso1g0789 1823 MobiDBLite consensus disorder prediction 766 786 - -
Gso1g0789 1823 MobiDBLite consensus disorder prediction 868 890 - -
Gso1g0789 1823 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 124 1809 IPR045208 GO:0003743
Gso1g0789 1823 MobiDBLite consensus disorder prediction 45 132 - -
Gso1g0789 1823 MobiDBLite consensus disorder prediction 1 159 - -
Gso1g0789 1823 Pfam MIF4G domain 1197 1419 IPR003890 GO:0003723|GO:0005515
Gso1g0789 1823 Gene3D - 1197 1432 - -
Gso1g0789 1823 MobiDBLite consensus disorder prediction 1424 1465 - -
Gso1g0789 1823 MobiDBLite consensus disorder prediction 608 647 - -
Gso1g0789 1823 MobiDBLite consensus disorder prediction 395 419 - -
Gso1g0789 1823 Pfam MA3 domain 1639 1745 IPR003891 -
Gso1g0789 1823 MobiDBLite consensus disorder prediction 379 393 - -
Gso1g0789 1823 MobiDBLite consensus disorder prediction 243 282 - -
Gso1g0789 1823 MobiDBLite consensus disorder prediction 1542 1592 - -
Gso1g0789 1823 MobiDBLite consensus disorder prediction 862 983 - -
Gso1g0789 1823 MobiDBLite consensus disorder prediction 175 282 - -
Gso1g0789 1823 MobiDBLite consensus disorder prediction 474 501 - -
Gso1g0789 1823 MobiDBLite consensus disorder prediction 379 419 - -
Gso1g0789 1823 SMART if4_15 1197 1419 IPR003890 GO:0003723|GO:0005515
Gso1g0789 1823 Coils Coil 1279 1299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0789 Gso-Chr1 28131775 28141881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0789 1 1819 Eukaryotic Initiation Factors Gene Family AT3G60240 45.338 0.0 1274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0789 K03260 - gmx:100790680 3275.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0789 1 28131775 28141881 Gso2g0717 2 7487443 7490646 GST