Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0597 ATGGAAGCTACACAGGGATTGCCATCATACACTGAATTTGAAGCCAAGGTTGCTGATTTTGGTTTTGCTAACTTGATACGAGACGGTGTAAGCCATCTCACAACAAGGGTTAAAGGCACCCTTGGATATTTGGCCCCAGAGTATGCTATGTGGGGGAAGGTTTCTGGGTGCTGTGATGTTTACAGTTTTGGGATTTTTCTTTTGGAGATTGTGAGTGCCAACAAACCAATTGAGAAACTCCCTGGTGGAGTGAAAAGGGACATAGTTCAATGGGTCACACCACATGTCCAAAAGGGTAACTTCACTCATATTGCTGATCCAAAGTTGAAGGGGCATTTTGATTTAGAGCAATTGAAATCTGTGGTCATGATAGGTATGAGGCGCATAGATAATACCCCAGAGAAGAGGCCTAGCATGCAAGAGGTGGTGGAGTGGCTCAAGGGTGTGTGTGTCAGTGTCTATGATTACATGCCCTATCTAGAATAA 486 0.4424 MEATQGLPSYTEFEAKVADFGFANLIRDGVSHLTTRVKGTLGYLAPEYAMWGKVSGCCDVYSFGIFLLEIVSANKPIEKLPGGVKRDIVQWVTPHVQKGNFTHIADPKLKGHFDLEQLKSVVMIGMRRIDNTPEKRPSMQEVVEWLKGVCVSVYDYMPYLE* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0597 161 ProSiteProfiles Protein kinase domain profile. 1 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso1g0597 161 PANTHER OS01G0253100 PROTEIN 11 149 IPR045271 GO:0004714|GO:0006468
Gso1g0597 161 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 11 149 - -
Gso1g0597 161 SUPERFAMILY Protein kinase-like (PK-like) 13 153 IPR011009 -
Gso1g0597 161 Pfam Protein tyrosine and serine/threonine kinase 14 145 IPR001245 GO:0004672|GO:0006468
Gso1g0597 161 Gene3D Transferase(Phosphotransferase) domain 1 9 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0597 Gso-Chr1 12816816 12819609 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0597 12 146 Receptor kinase-like Gene Family AT1G29740 40.441 2.55e-28 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Gso1g0597 PK_Tyr_Ser-Thr 8e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0597 - - gmx:113002208 335.109