Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0592 ATGGCAAAAGATTCTGCCGATGCTGATTCCCATCACAGGCGTCTTGGTCTTTTGAAAGATCAAGTTCACTTGGTTAAAAGGAAAGGCTCTGATCGCTATGAGATTGCTCCAATCCAAGACCAACTATCATTTGAGAAGGGGTTTTTCATAGTGATCCGTGCATGCCAATTGTTATCCCAAAAGAATGATGGAATAATATTGGTAGGGGTGGCAGGTCCTTCAGGGGCTGGGAAGACTATATTTACTGAAAAGATACTCAACTTCATGCCCAGCATTGCAATCATTTCAATGGATAATTACAATGATGCTAGTCGAATTGTTGATGGGAATTTTGATGATCCACGCTTAACAGACTATGACACATTACTCCAGAATCTGCACAATTTAAAGGAAGGAAAGCCAGTTCAAGTTCCCATATATGATTTCAAGTCCAGTTCACGTACAGGATACAGGACAGTCGAAGCCCCGAGTTCTCGAATTGTGATTATAGAGGGCATCTATGCCTTGAGTGAGAAGTTGCGACCCCTGATGGACCTTCGAGTCTCTGTTACAGGAGGAGTTCACCTTGACCTTGTAAAACGAGTTATACGTGATATACAACGTGCTGGTCAAGAACCTGAAGAAATTATTCATCAAATATCAGAGACGGTGTATCCAATGTACAAGGCATTTATCGAGCCAGATCTCCAGACAGCACATATAAAAATCATCAACAAATTCAATCCATTTACTGGATTCCAGAGTCCTACTTATATATTAAAGTCAGGAAGGAATGTAGAAGTTGATAAAATTAAAGCTGTTCTCGCTGAGGATTTTAAGGAAACAACAGAACAAACTTATGACATATATCTTCTACCACCCGGTGAAGATCCAGAAACTTGTCAATCATATTTACGGATGCGAAATAAGGATGGGAAATACAGTCTCATGTTTGAGGAATGGGTGACAGATAATCCATTTGTCATATCACCAAGAATTACTTTTGAGGTCAGTGTGCGCCTTCTTGGTGGACTAATGGCTTTGGGATACACAATAGCCACTATCCTTAAGAGAAACAGCCATGTCTTTTCTGATGATAGGGTTTGTGTAAAACTAGATTGGCTTGAGCAACTTAATAGACATTATGTTCAGGTACAAGGCAGAGATCGTTTAGTTCTAAAATACATAGGAGAACAGCTGGGTATAGAAGGTTCCTACATTCCTCGTACCTACATTGAGCAAATTCAAATTGAAAAGCTTGTGAATGAGGTTATGGCTCTACCAGATGATTTGAAGACAAGGCTCAGCCTAGATGAGGATTTGGTGTCAAGCCCGAAAGAAGCACTATCTAGAGCTTCTGCCGGCAGAGTTGCCATGAGGAATAAACATCTGAGGAGTGGAATATCACAGTCGTATACCAATCAGAGGGACAAAAATCTAGCTAAGGTTACTGGATATGGTGCCAACAATAGAAGGTTTGGTGAAAGCAATTCAGATTCCACCGCAATGCCAGTAAATCAGGGAACCATCAATCAGCTTTCAGACCAAATTTCTGCCCTCAATGATAGAATGGACGAGTTTACAAATCGCATTGAAGAGCTGAATTCCAAGTTAACCATCAAGAAAAATTCTCCAAGCCAACAAAACATGTCACTTCAAGCTGAGACATGCAATGGTTCTGCTCCCACCTCTTACTTCATCACTAGTTTGGGCAGTGGTTCCCTTACTGGATCTAAAATGACAAATTCCTCTTCGTCCTCGCAGTTAGCTAAAGATTCTCCTTTGATGGATGAGATATCAAGCATCGCACGCAGTCAGCGTCAGGTCATGCATCAATTGGACAATCTCAATAATCTTCTCAGGGGGAGCTTGGGGGAGAAGTCTCGCCCAACAAGAACCAACAGCGGGAAAAGCATCACCATGTCATCGGATTCCATGGGAGCTTGTGTTATGGCGGTGGTCACAGTTGGTTGTTTGGGGATCTTCTTGATGAAGGGTTTTTTGAACAAAAAGTGA 1995 0.416 MAKDSADADSHHRRLGLLKDQVHLVKRKGSDRYEIAPIQDQLSFEKGFFIVIRACQLLSQKNDGIILVGVAGPSGAGKTIFTEKILNFMPSIAIISMDNYNDASRIVDGNFDDPRLTDYDTLLQNLHNLKEGKPVQVPIYDFKSSSRTGYRTVEAPSSRIVIIEGIYALSEKLRPLMDLRVSVTGGVHLDLVKRVIRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIINKFNPFTGFQSPTYILKSGRNVEVDKIKAVLAEDFKETTEQTYDIYLLPPGEDPETCQSYLRMRNKDGKYSLMFEEWVTDNPFVISPRITFEVSVRLLGGLMALGYTIATILKRNSHVFSDDRVCVKLDWLEQLNRHYVQVQGRDRLVLKYIGEQLGIEGSYIPRTYIEQIQIEKLVNEVMALPDDLKTRLSLDEDLVSSPKEALSRASAGRVAMRNKHLRSGISQSYTNQRDKNLAKVTGYGANNRRFGESNSDSTAMPVNQGTINQLSDQISALNDRMDEFTNRIEELNSKLTIKKNSPSQQNMSLQAETCNGSAPTSYFITSLGSGSLTGSKMTNSSSSSQLAKDSPLMDEISSIARSQRQVMHQLDNLNNLLRGSLGEKSRPTRTNSGKSITMSSDSMGACVMAVVTVGCLGIFLMKGFLNKK* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0592 664 PANTHER PHOSPHORIBULOKINASE/URIDINE KINASE-LIKE PROTEIN 5 656 - -
Gso1g0592 664 CDD UMPK_like 67 239 - -
Gso1g0592 664 Pfam Phosphoribulokinase / Uridine kinase family 68 236 IPR006083 GO:0005524|GO:0016301
Gso1g0592 664 PRINTS Uridine kinase signature 65 82 - -
Gso1g0592 664 PRINTS Uridine kinase signature 132 147 - -
Gso1g0592 664 PRINTS Uridine kinase signature 188 198 - -
Gso1g0592 664 PRINTS Uridine kinase signature 224 237 - -
Gso1g0592 664 PANTHER URIDINE KINASE 5 656 - -
Gso1g0592 664 Coils Coil 503 537 - -
Gso1g0592 664 Gene3D - 253 412 - -
Gso1g0592 664 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 38 236 IPR027417 -
Gso1g0592 664 SUPERFAMILY CYTH-like phosphatases 263 407 IPR033469 -
Gso1g0592 664 ProSiteProfiles CYTH domain profile. 248 410 IPR023577 -
Gso1g0592 664 Pfam CYTH domain 269 404 IPR023577 -
Gso1g0592 664 Gene3D - 66 245 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0592 Gso-Chr1 12178603 12190215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0592 66 236 PRT Gene Family AT5G40870 27.778 1.10e-18 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0592 K00876 - gmx:100797542 1284.24