Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0581 ATGGTTCCTAGTGAGATCAGAGGAGTCCACTATCTAGCACCTGAAAATCCATTCCTAGTTCCACCAAACTTTAGCCTTCTGCAAAGTGACATCCCTAATCTCCATCTTAACACCCTCCTAAGCAACTTTCCAAACTGCCACTTCCCTCCTTCAGGCCATGAATTTGTTGTTCCTCCCTCTTCATGCCTCAGCAGCAACTCAACCTCTGATGAAGCTGATGAAATCCAGTTCAACATCATCGACGAAAGGAAGCACCGGAGAATGATATCGAACCGAGAATCCGCTCGCAGGTCAAGGATGAGGAAGCAGAAGCACCTGGATGAGCTGTGGTCACAGGTTGTTAGGCTCAGAACTGAGAACCACAACCTTATTGACAAACTCAACCATGTGTCTGAATCCCATGACAGAGTCCTCCAAGAGAATGCACGCCTCAAGGAAGAAGCTTCCGCTCTTCGCCAAATGCTAGCAGACATGCAAATTGGAACCGCTTTTGCTTGCACCATGGAAGATTTGGAGGACCTTCCATGCAACACTTCTCAACTCAAACCTGATCCCTTAAACCAATCAATCACTCCTGCAGACATGATTCATGAATGA 597 0.469 MVPSEIRGVHYLAPENPFLVPPNFSLLQSDIPNLHLNTLLSNFPNCHFPPSGHEFVVPPSSCLSSNSTSDEADEIQFNIIDERKHRRMISNRESARRSRMRKQKHLDELWSQVVRLRTENHNLIDKLNHVSESHDRVLQENARLKEEASALRQMLADMQIGTAFACTMEDLEDLPCNTSQLKPDPLNQSITPADMIHE* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0581 198 Pfam bZIP transcription factor 83 141 IPR004827 GO:0003700|GO:0006355
Gso1g0581 198 Coils Coil 127 161 - -
Gso1g0581 198 SMART brlzneu 79 143 IPR004827 GO:0003700|GO:0006355
Gso1g0581 198 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 86 101 IPR004827 GO:0003700|GO:0006355
Gso1g0581 198 SUPERFAMILY Leucine zipper domain 83 133 IPR046347 GO:0003700|GO:0006355
Gso1g0581 198 MobiDBLite consensus disorder prediction 177 198 - -
Gso1g0581 198 CDD bZIP_plant_GBF1 84 135 IPR045314 GO:0003700|GO:0006355
Gso1g0581 198 Gene3D - 81 136 - -
Gso1g0581 198 PANTHER BZIP PROTEIN (ATBZIP48) 1 191 - -
Gso1g0581 198 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 191 IPR044521 -
Gso1g0581 198 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 81 144 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0581 Gso-Chr1 11844582 11845480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0581 23 171 bZIP Transcription Factor Family AT3G30530 57.055 1.14e-50 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso1g0581 bZIP_1 6.3e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0581 - - gmx:778126 394.43