Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0579 ATGTCAAAACCAACAACATTTTACTTGACATTAGTGTTTCGATTAAGGTACCAGGTTTTGGGTTTTCAAGATTGCTCCCCAATGATGCTCAAGGACAAGAGTGATGTGTATAGCTTTGGGGTTGTACTTATTGAGCTGATATCATCCATGGCAACAGTTGATGCAGCCAAGGAAAGAGATGAAGCTAACTTGGCAAATCTTGCCATGAAAAAGATGCAAAATGTAAAGCTTAGTGAGCTTGTAGACCAATCCTTTGGGTTTGAGTCAGACCAAGTAGTTAAAAGGATACTAACTTCAGTAGCAGGGTTGGCCTTTCGGTGTGTGCAAAGAGACAATGAATTAAGTCCTTCTATGGATGAAGTTCTGGAAGCACTCAACAATTTTCAAAATGAGAATTATGAGTCTGAGAATCTAGAGAAAGAAGATGATGATGGTGTTATCTCTTCCACTTCATCCACCGAAGTACATCCACCCCAGCCAGCTTCACAGGACTCGGGTCAAGTTGGAATTTTAATGAATAATAAGCTACCAAGTTCACTGAATTCCTTGACTGAGAAACTGGAAGGGTGGTACGTGGATCTAGAACTGGCTAAAAGAGTTAGAATCATGCATATACAAGTTTTAATTAGTTATGAAATTTTATAA 645 0.3891 MSKPTTFYLTLVFRLRYQVLGFQDCSPMMLKDKSDVYSFGVVLIELISSMATVDAAKERDEANLANLAMKKMQNVKLSELVDQSFGFESDQVVKRILTSVAGLAFRCVQRDNELSPSMDEVLEALNNFQNENYESENLEKEDDDGVISSTSSTEVHPPQPASQDSGQVGILMNNKLPSSLNSLTEKLEGWYVDLELAKRVRIMHIQVLISYEIL* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0579 214 Gene3D Transferase(Phosphotransferase) domain 1 15 155 - -
Gso1g0579 214 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 29 154 IPR044652 -
Gso1g0579 214 MobiDBLite consensus disorder prediction 133 167 - -
Gso1g0579 214 MobiDBLite consensus disorder prediction 148 167 - -
Gso1g0579 214 PANTHER WALL-ASSOCIATED KINASE-LIKE PROTEIN 29 154 - -
Gso1g0579 214 Coils Coil 121 141 - -
Gso1g0579 214 SUPERFAMILY Protein kinase-like (PK-like) 31 132 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0579 Gso-Chr1 11771719 11772434 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0579 30 186 Receptor kinase-like Gene Family AT1G25390 39.490 1.09e-32 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Gso1g0579 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0579 - - gsj:114407336 416.772