Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0546 ATGGCTTTTATGTCGGAGGTCAACATGAGCTTCTCTCACTACATGGATGATGAATATGAGAAACTCTTCCGGAGAATGAACCCTCCCAGGGTTGTAATCGATAATGAAGCCTGCAAGAATGCCACCGTTATACGGGTTGATAGTGCAAACAAGCATGGAATACTTCTTGAAGTTGTACAAATCCTCACTGATCTAAACCTCATCATAACTAAGGCTTACATTTCTTCTGATGGTGGATGGTTCATGGATGTTTTTAATGTTACTGGCCAAGATGGAAACAAGGTTACTGATGAAGCTATTTTGGATTACATTAGAAAGTCTCTTGGTCCCGAATCTTGTGTTACATCTCCTATGAGATCTGTTGGGGTTAAGCAAACAACGGACCACATTGCAATTGAGCTTATGGGGACTGATAGGCCAGGGCTGCTTTCAGAAGTGAGTGCTGTTCTGACCAACCTCAAGTGCAATATAGTGAATGCAGAGGTGTGGACTCACAACACTCGTGCTGCTGCTGTAATGCACGTGACTGACGAAGAATCCGGTTCGGCCATTACTGATCCTCAGAGGCTTTCTATAATCAAGGAGCTTCTATGCAATGTTCTTGGTGGTGGCAACAAGAAGAGGGGGGCTAAGACTGTTGTCACAGATGAAGCCACACACACTGAGAGAAGGCTTCACCAAATGATGTTTGCTGATAGGGATTATGAACGAGTTAATGATGATGATGACTTTGATGAGAAGCAAAGGCCAAATGTGAATGTTGTGAATTGGTCTGACAAGGATTATTCTGTGGTTACTATTCAGTGTAAGGATAGGCCAAAGCTTCTCTTCGACACAGTTTGTACTTTGACAGACATGCAGTATGTGGTTTTTCATGCAAACATCGATGCTGAGGGTCCAGAAGCATATCAGGAATACTACATCAAGCACATAGATGGGTCCCCTGTGAAATCAGATGCAGAAAGACAAAGAGTGATACAATGTCTTGCAGCTGCAATTCAAAGAAGAGTTTCTGAGGGTTTGAAGCTAGAGCTCTGCACCACCGACAGAGTTGGATTACTATCTGATGTTACACGAATCTTTAGAGAGAATAGCCTCACAGTTACAAGGGCAGAAGTGGCCACAAAAGGAGGCAAAGCTGTGAACACTTTCTATGTTCGTGGTGCTTCTGGTTTCCCTGTTGATTCTAAGACCATAGAATCCATAAGGCAAACGATTGGCAATACAATCCTTAAAGTAAAGGGTAGTCCTGAAGAGATGAAATCTGTTCCTCAGGATTCTCCTACCAGATCCCTCTTTAGTGGTCTTTTCAAGTCCAGATCTTTTGTGAACTTTGGCTTGGTTAAGTCCTATTCTTGA 1359 0.429 MAFMSEVNMSFSHYMDDEYEKLFRRMNPPRVVIDNEACKNATVIRVDSANKHGILLEVVQILTDLNLIITKAYISSDGGWFMDVFNVTGQDGNKVTDEAILDYIRKSLGPESCVTSPMRSVGVKQTTDHIAIELMGTDRPGLLSEVSAVLTNLKCNIVNAEVWTHNTRAAAVMHVTDEESGSAITDPQRLSIIKELLCNVLGGGNKKRGAKTVVTDEATHTERRLHQMMFADRDYERVNDDDDFDEKQRPNVNVVNWSDKDYSVVTIQCKDRPKLLFDTVCTLTDMQYVVFHANIDAEGPEAYQEYYIKHIDGSPVKSDAERQRVIQCLAAAIQRRVSEGLKLELCTTDRVGLLSDVTRIFRENSLTVTRAEVATKGGKAVNTFYVRGASGFPVDSKTIESIRQTIGNTILKVKGSPEEMKSVPQDSPTRSLFSGLFKSRSFVNFGLVKSYS* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0546 452 CDD ACT_ACR_3 262 336 - -
Gso1g0546 452 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 10 450 IPR040217 -
Gso1g0546 452 CDD ACT_ACR_1 41 111 - -
Gso1g0546 452 ProSiteProfiles ACT domain profile. 342 418 IPR002912 -
Gso1g0546 452 ProSiteProfiles ACT domain profile. 43 122 IPR002912 -
Gso1g0546 452 SUPERFAMILY ACT-like 338 407 IPR045865 -
Gso1g0546 452 SUPERFAMILY ACT-like 126 194 IPR045865 -
Gso1g0546 452 Gene3D - 125 197 - -
Gso1g0546 452 SUPERFAMILY ACT-like 38 106 IPR045865 -
Gso1g0546 452 CDD ACT_ACR_2 131 203 - -
Gso1g0546 452 ProSiteProfiles ACT domain profile. 131 218 IPR002912 -
Gso1g0546 452 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-LIKE ISOFORM X1 10 450 - -
Gso1g0546 452 Pfam ACT domain 42 102 IPR002912 -
Gso1g0546 452 Pfam ACT domain 132 184 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0546 Gso-Chr1 9791983 9795820 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0546 - - gmx:100787134 892.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0546 1 9791983 9795820 Gso2g1014 2 11954062 11957948 GST