Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0518 ATGGATCGGAGCTCTTTCTCACCGGGTACGGGAAAAACCCGAACCAAACCCGACATATACTCTACCTTCGTGGTCCACGACGACGACGACGAAGACTCCTCTCTTCCTCCGCTCCTCAGGCGCCTCCCCAAGGACTTCGGCGGCGGAGCGCCGCTGGACTACGACGACGACGAAGACGAAGGCGCCGGCGACTTCGGCACAATGATCGTGAAATCTGACCGGAGTCGGCAGCGCGACCGGTCGTCTTCCGGCGTGGCTTCGCCGGCATGGAAGGCTCGGAATCCTCTTAACAGATTCGGCGCCGAGGATGACGGCGATGAGGAGGACGACGACGATGGCGGAGGATTCTCGACGTTCGTTGTGCGTTCGACGGTGAAGTCCGGCGAGAGAGAGTCGGTGAGCGGAACCGTGGTGCGACGGACCAGTGGCGGCAGCGGCGGTCTCGGTGTCGGTTCCACGATGGAGAGAGCGGTGGCGAGCATGCAAGGGATGGGAGAGTTTGGATTTGGAAAGCAGAGGAAGGGAAGTGGATCTTCGCAGAACGATGAAGGAAGGCATCAATCGATAACGACGAAGGTTTCGACGAGTTCGATCCCTGATAGTGTTACTAGAGAGGACCCTACGACCAAATACGAATTGCTCAATGAACTTGGGAAGGGGTCCTATGGGGCTGTTTACAAAGCAAGGGATCTGAGAACCTCGGAGATGGTTGCCATCAAAGTAATATCGTTATCCGAAGGGGAGGAGGGTTATGAGGAAATCCGTGGTGAGATTGAAATGTTACAACAATGTAATCATCCAAATGTTGTCCGTTATCTTGCAAGCTATCAGGGAGAAGAGTATCTTTGGATAGTGATGGAGTATTGCGGTGGTGGTAGTGTTGCTGATTTGATGAGCGTGACTGACGAGCCACTTGATGAGGGTCAAATAGCATATATCTGTAGAGAAGCACTGAAGGGTCTTGATTATTTGCACTCAATTTTTAAAGTCCATAGAGACATTAAAGGTGGGAATATCTTATTAACTGAACAAGGAGATGTCAAGCTAGGGGATTTCGGTGTTGCTGCACAGCTTACAAGGACTATGTCAAAACGCAATACGTTCATTGGAACTCCTCATTGGATGGCTCCAGAAGTTATTCAGGAAAGTCGCTATGATGGAAAGGTAGATGTTTGGGCTCTTGGTGTGTCTGCTATTGAAATGGCTGAGGGTGTTCCACCAAGATCATCAGTACATCCAATGAGGGTTTTATTCATGATATCAATCGAACCAGCTCCGATGCTTGAGGATAAAGAAAAATGGTCTCTATATTTCCATGATTTTGTTGCTAAGTGCCTAACAAAAGAATTGCGTCTCCGCCCTACTGCATCTGAGATGTTGAAGCACAAATTCTTTGAAAAGTGGAAAAGTGGATCTGCTGCAATGTTGCCAAAACTAGAAAAGGCAAGGCAAATCAGGGCTTCAATGGCTTCGCAGGTGCAAGCTCTTCCAGTTACATCAGAAGATCAGGAGTTAGATTCAAAACTAAATGATGAATATGGAGATACTGTGCCATCCAGACCTCATAACATCGGTGTTGAGGGGGCTGCTGATCTCTCTTCACATGGCACTACAAGGAAGCTACATAAAGTGGAAGATGTAGACATGAGTGAAGGCAACTTTGGCACTGTTATAATCCATGGAGATGAATTACATAAGACCACACAAGATGCAGATTCTGCAGTTTCTGTATCTGCTCTGACCAGTGGCACAAGAGGCAGATTGACTGACTCTGGGATTGAGAGTCAGAAAGTTGGTATTATGAACACTGCCTCTTTTAGAGGATATAGTGCTACTACCAATACCATTCAATCGTCTTTACCTTATGTTAGTAATTCAGCTGAGCAGAGCCTCAAAACCAAAGGTACTCATCGAGCACAAGCTGGAATTGGTGGTGATATAAGCAATAGCATATTCAAGAATGAAACAGTCAGCCATAAAGCATTTGCTTTACAAGATAAGCTTTGGTCCATTTATGCTGCCGGTAATACAGTGCCCATCCCATTCTTAAGGGCAACAGATATATCACCTATTGCGCTTCTGTCAGACAATGTACTTGGTGGCATACAACAGGATACTGGTGGAACTGGAACAGTGGAAGCATTGCAAGAGCTTTTTAGTGGTGATGGACAGTCCAAAAAGGGCAGGAGAGGACTAAATGAGCAGATGCCTTTTCCTCCAAGCATTTACCAAAGATTGACATCAAGTTCTACTCTAATGAATTTGGCACAGGCTTTAGCTTACCATAAGATGTGTTATGAAGATATGCCGCTGCAGGAGCTGCAAGCGACCCAGGAGCAGCGGACTATCCAAAATCTATCTGACACCCTTCGAACCATTCTTCGGTTGTAG 2391 0.4722 MDRSSFSPGTGKTRTKPDIYSTFVVHDDDDEDSSLPPLLRRLPKDFGGGAPLDYDDDEDEGAGDFGTMIVKSDRSRQRDRSSSGVASPAWKARNPLNRFGAEDDGDEEDDDDGGGFSTFVVRSTVKSGERESVSGTVVRRTSGGSGGLGVGSTMERAVASMQGMGEFGFGKQRKGSGSSQNDEGRHQSITTKVSTSSIPDSVTREDPTTKYELLNELGKGSYGAVYKARDLRTSEMVAIKVISLSEGEEGYEEIRGEIEMLQQCNHPNVVRYLASYQGEEYLWIVMEYCGGGSVADLMSVTDEPLDEGQIAYICREALKGLDYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGVPPRSSVHPMRVLFMISIEPAPMLEDKEKWSLYFHDFVAKCLTKELRLRPTASEMLKHKFFEKWKSGSAAMLPKLEKARQIRASMASQVQALPVTSEDQELDSKLNDEYGDTVPSRPHNIGVEGAADLSSHGTTRKLHKVEDVDMSEGNFGTVIIHGDELHKTTQDADSAVSVSALTSGTRGRLTDSGIESQKVGIMNTASFRGYSATTNTIQSSLPYVSNSAEQSLKTKGTHRAQAGIGGDISNSIFKNETVSHKAFALQDKLWSIYAAGNTVPIPFLRATDISPIALLSDNVLGGIQQDTGGTGTVEALQELFSGDGQSKKGRRGLNEQMPFPPSIYQRLTSSSTLMNLAQALAYHKMCYEDMPLQELQATQEQRTIQNLSDTLRTILRL* 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0518 796 MobiDBLite consensus disorder prediction 1 17 - -
Gso1g0518 796 MobiDBLite consensus disorder prediction 120 141 - -
Gso1g0518 796 Pfam Protein kinase domain 211 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso1g0518 796 MobiDBLite consensus disorder prediction 166 206 - -
Gso1g0518 796 SUPERFAMILY Protein kinase-like (PK-like) 191 482 IPR011009 -
Gso1g0518 796 ProSiteProfiles Protein kinase domain profile. 211 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso1g0518 796 SMART serkin_6 211 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso1g0518 796 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 152 786 - -
Gso1g0518 796 CDD STKc_MAP4K3_like 210 465 - -
Gso1g0518 796 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 152 786 - -
Gso1g0518 796 MobiDBLite consensus disorder prediction 21 38 - -
Gso1g0518 796 MobiDBLite consensus disorder prediction 1 152 - -
Gso1g0518 796 ProSitePatterns Protein kinases ATP-binding region signature. 217 240 IPR017441 GO:0005524
Gso1g0518 796 Gene3D Transferase(Phosphotransferase) domain 1 207 504 - -
Gso1g0518 796 MobiDBLite consensus disorder prediction 173 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0518 Gso-Chr1 8569695 8598706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0518 7 796 MAP Kinase Kinase Kinase Kinase AT1G69220 58.053 0.0 833
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Pl Gso1g0518 Pkinase 9.8e-68 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0518 1 8569695 8598706 Gso2g0991 2 11597663 11613207 GST