Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0515 ATGCCAAAGGAATGGACAGACACTCGAGCTAATTGGAGGGACGGGAAAGACATAGCATCATTCTACTTCACCCGTTTCCCCGAGGATGCAACCGAGAAAGACCTATGGCACCATTTCAAAAAGTTTGGTGATGTAACGGAGATCTTCATCTCCAAGAATCGGAACAAGAATGGTAGGAGGTATGGGTTTGCTAGATTTAAAGATGTGGAGGATGTGTACAATCTAGAAAGGAAACTAGATAACATCGTCTTTGGCGGGCTCAAGATGTATGTCAACATCCCAAAATTTGGGAGAGACAGGTATGAAAAGACAAACCCAGAAGCTAAACGAGTGGAATATGATGAGCAAAAGGAAAAGGAGGCACCCAACAAAGACATCTATATCTGA 387 0.4315 MPKEWTDTRANWRDGKDIASFYFTRFPEDATEKDLWHHFKKFGDVTEIFISKNRNKNGRRYGFARFKDVEDVYNLERKLDNIVFGGLKMYVNIPKFGRDRYEKTNPEAKRVEYDEQKEKEAPNKDIYI* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0515 128 PANTHER RNA RECOGNITION MOTIF 19 113 - -
Gso1g0515 128 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 19 113 - -
Gso1g0515 128 SMART rrm1_1 20 92 IPR000504 GO:0003723
Gso1g0515 128 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 25 88 IPR000504 GO:0003723
Gso1g0515 128 CDD RRM_SF 22 92 - -
Gso1g0515 128 Gene3D - 5 105 IPR012677 -
Gso1g0515 128 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 19 96 IPR000504 GO:0003723
Gso1g0515 128 SUPERFAMILY RNA-binding domain, RBD 21 97 IPR035979 GO:0003676
Gso1g0515 128 MobiDBLite consensus disorder prediction 107 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0515 Gso-Chr1 8483776 8484627 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0515 8 117 Eukaryotic Initiation Factors Gene Family AT1G34140 23.636 1.49e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0515 - K13190 gsj:114386664 274.633