Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0508 ATGAAGGATGACGCCGACGAGGAGAGGCAGTTCTTGGGTGGCGAGTGGTGGATTGTGATCAGAGAATGGGCCGGAATTAAAATGTATGAGAAGCATGAAAGGAGTACTGTGGGGCTTCTTGGTAAGGTTTTCTCCTTCAGAATAGTTTCCACTCCTCATAGAGAGCCTAATAACGTGGCCGAGACAGTGTTTGTGTATGCTGGAATGGCCTTGCTTTCCAAGGCTGCAATTTCCAAGGAAATGAGCCCTTATGTGTTTGTTGTTTATAGACAAGCCTTTGCATCAGTTGCTCTATCTCCATTTGCTTTCTTTGACAGCAAGCAATCAGCTCCTTTGTCATGCAACTTGTTGTGCAAATTGTTGTGCAAATTGTTTCTAGTTTCCCTTGTTGGGTTAACTGCAAGTTCAAACCTTTACTATGTTTCAATCAACTACACCACTGCAACATTTGCTGCAGCCGCCACAAATACTGTCCCTGCCATTACTTTCATCATGGCTGTTTTAATTAGGATGGAAAGCATTTCCGTAAAACGTGTGCATGGATTGGCCAAGATTTTGGGGTCCGTTCTAAGCCTTGCTGGGGCAATAACATTTGCTTTAGTCAAAGGACCTCACCTGGGTTTCATGAAATGCTATCCAGAAAATTAG 648 0.4367 MKDDADEERQFLGGEWWIVIREWAGIKMYEKHERSTVGLLGKVFSFRIVSTPHREPNNVAETVFVYAGMALLSKAAISKEMSPYVFVVYRQAFASVALSPFAFFDSKQSAPLSCNLLCKLLCKLFLVSLVGLTASSNLYYVSINYTTATFAAAATNTVPAITFIMAVLIRMESISVKRVHGLAKILGSVLSLAGAITFALVKGPHLGFMKCYPEN* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0508 215 SUPERFAMILY Multidrug resistance efflux transporter EmrE 89 192 - -
Gso1g0508 215 Pfam EamA-like transporter family 63 191 IPR000620 GO:0016020|GO:0016021
Gso1g0508 215 PANTHER WAT1-RELATED PROTEIN 62 205 - -
Gso1g0508 215 PANTHER WAT1-RELATED PROTEIN 62 205 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0508 Gso-Chr1 7914480 7925795 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0508 64 215 Nodulin-like Gene Family AT2G39510 38.158 5.64e-33 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0508 - - gmx:100804258 245.358