Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0506 ATGACTATGGATGAAGTTGGTAGTAGCTCTGAGTGGAGCAAAGAACAGGATAAAGCATTTGAAAATGCCTTGGCAATTCATCTTGAGGATGCTTCAGACCGATGGGAGAAGATTATGGCTGATGTACCGAGGAAAACCTTGGAAGAGATTAAACACCACTATGAGCTCTTGGTTGAAGATGTTAACCAGATTGAATCTGGTTGTGTGCCTTTAGCATCTTATAATTCTTCTCCAGAGGGATCAATAAGCCATGCTAGTGATGAAGGAGCTGGCAAGAAGGGAGGCCACTCTTGGAATAGTAACAATGAATCTAATCATGGAACTAAGGCTTCAAGATCAGATCAGGAACGGCGAAAGGGTATTGCATGGACAGAGGATGAACACAGGTTCGATTGTACTGTGGAAGAGGCAATTCTGACAGGAAGCTTACTTGTTACCTCTTTTGTTCATGCTTCATGA 459 0.427 MTMDEVGSSSEWSKEQDKAFENALAIHLEDASDRWEKIMADVPRKTLEEIKHHYELLVEDVNQIESGCVPLASYNSSPEGSISHASDEGAGKKGGHSWNSNNESNHGTKASRSDQERRKGIAWTEDEHRFDCTVEEAILTGSLLVTSFVHAS* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0506 152 ProSiteProfiles Myb-like domain profile. 10 58 IPR001005 -
Gso1g0506 152 PANTHER TRANSCRIPTION FACTOR KUA1 6 130 - -
Gso1g0506 152 CDD SANT 11 58 IPR001005 -
Gso1g0506 152 Pfam Myb-like DNA-binding domain 10 54 IPR001005 -
Gso1g0506 152 SUPERFAMILY Homeodomain-like 11 65 IPR009057 -
Gso1g0506 152 MobiDBLite consensus disorder prediction 70 119 - -
Gso1g0506 152 Gene3D - 4 71 - -
Gso1g0506 152 SMART sant 8 60 IPR001005 -
Gso1g0506 152 PANTHER HOMEODOMAIN-LIKE TRANSCRIPTIONAL REGULATOR-RELATED 6 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0506 Gso-Chr1 7902408 7902941 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gso1g0506 Myb_DNA-binding 1.1e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0506 - - gsj:114371921 312.768