Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0501 ATGAACATGTTTTTTTCTCTGTCCATTGGTTCTTCTGCTGCATTGCCCCTCAGATGCACCTCCAAGCTCACTTCTTTCAGGGTTGTTGCTGATGCGGATGGCTTCCCTTCATTTCTTCCCAGAGAAATTCACAACATTCAAGACCCTTTTGCCAGAAAATTCGCCTTGCGCATTCAGAGGCTACCCGTGCCTGTTAGGTTCTCAGAAAATCCCATCATGAGTAGTTGTGTGAAGCCACTGGTGCAGACCAAGGAAACCCCAGTTGTTCTTCTACATGGTTTTGACAGCTCATGTCTAGAATGGAGATATGTATTACCATTGCTTGAGGAATCTGGTATTGAGACATGGGCCATTGACATTCTTGGTTGGGGTTTCTCTGATTTAGAAAAACTTCCTCCTTGTGATGTGGTATCCAAGCGTGATCACTTCTACCAGTTTTGGAAGTCTTACATCAGAAGGCCAATGATATTGGTTGGACCAAGCCTTGGCTCTGCTGTTGCCATTGACTTTGCGGTCAATTATCCAGAAGCTGTGAAGAAGCTTGTTCTGATTGGTGCTAGTGTATATGCAGAGGGAACTGGAAAGCTAGCAACCTTACCCAGAGCAGTAGCCTATGCCGGGGTTAATTTATTGAAGAGCCTTCCGTTACGCCTATATGCCACCTATTTGACCTTCACAAAAATTTCCTTCAGCACCAGCCTTGATTGGACTAATGTGGGCCGCTTGCATTGTTTCTTGCCTTGGTGGGATGATGCTACAGTGGATTTTATGACAAGTGGTGGTTACAGTGTTGCTCCTTTGATAGGAAAGGTAAAACAGAATACACTGATAATATGGGGTGAAAATGACCGCATCATCAGCAATAAGTTTGCAGTGCGACTCCACTGTGAGTTACCTGATGCAATTATACGCCAAATACCTTATTGTGGACATCTTCCTCATCTTGAAAGACCAGATTCTACTATCAAACTAATTGTTGAATTTGTGCAAAGAGAGAGTAAGACATTCAGTCAATGTGTTGCACAAGTATGA 1032 0.436 MNMFFSLSIGSSAALPLRCTSKLTSFRVVADADGFPSFLPREIHNIQDPFARKFALRIQRLPVPVRFSENPIMSSCVKPLVQTKETPVVLLHGFDSSCLEWRYVLPLLEESGIETWAIDILGWGFSDLEKLPPCDVVSKRDHFYQFWKSYIRRPMILVGPSLGSAVAIDFAVNYPEAVKKLVLIGASVYAEGTGKLATLPRAVAYAGVNLLKSLPLRLYATYLTFTKISFSTSLDWTNVGRLHCFLPWWDDATVDFMTSGGYSVAPLIGKVKQNTLIIWGENDRIISNKFAVRLHCELPDAIIRQIPYCGHLPHLERPDSTIKLIVEFVQRESKTFSQCVAQV* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0501 343 PANTHER ALPHA/BETA FOLD HYDROLASE 1 343 - -
Gso1g0501 343 PANTHER HYDROLASE 1 343 - -
Gso1g0501 343 Gene3D alpha/beta hydrolase 79 337 IPR029058 -
Gso1g0501 343 PRINTS Alpha/beta hydrolase fold signature 112 127 IPR000073 -
Gso1g0501 343 PRINTS Alpha/beta hydrolase fold signature 157 170 IPR000073 -
Gso1g0501 343 PRINTS Alpha/beta hydrolase fold signature 171 184 IPR000073 -
Gso1g0501 343 PRINTS Alpha/beta hydrolase fold signature 275 289 IPR000073 -
Gso1g0501 343 SUPERFAMILY alpha/beta-Hydrolases 86 331 IPR029058 -
Gso1g0501 343 Pfam Alpha/beta hydrolase family 88 321 IPR000073 -
Gso1g0501 343 PRINTS Epoxide hydrolase signature 92 110 IPR000639 GO:0003824
Gso1g0501 343 PRINTS Epoxide hydrolase signature 112 127 IPR000639 GO:0003824
Gso1g0501 343 PRINTS Epoxide hydrolase signature 171 184 IPR000639 GO:0003824
Gso1g0501 343 PRINTS Epoxide hydrolase signature 306 328 IPR000639 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0501 Gso-Chr1 7764592 7771376 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0501 87 329 Acyl Lipid Metabolism Gene Families AT3G10840 24.841 2.70e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0501 - - gmx:100792060 699.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0501 1 7764592 7771376 Gso2g0975 2 11342182 11349051 GST