Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0499 ATGGCTCTTTTGATGTATTTTGTGCTTTTTCTTGCCCTCGCTGGCCATTCAAGTGCTCTTTACTGTGTATGCAAAGATGGTGTGGGTGATCAAGCTCTTCAGAAAGCAATAGACTATGCATGTGGTGCTGGAGCTGACTGTACCCCTATTCTCCAAAATGGAGCCTGTTTTCAACCCAACACTGTGAAGGATCACTGCAACTATGCTGTTAATAGCTATTTCCAGAGAAAGGGTCAAGCTCAGGGAAGCTGTGATTTTTCTGGTGCTGCCACCCCTAGTCAAACTCCACCTACTGCAGCATCTACATGTGTTTACCCCTCAAGTCCTAGCAATGCTGGAACAGGCACCACAGCAACCCCAACAACCACTACACCAACAACAGGCACACCACCCACCACCTTAACTCCAACCACTCCCACTAGTACAACCCCAGGCATTGGCACCGGCACAGGAACAACCACGGGCACGGGCACGGGCACGGGCACAACCACAGGTAACCCTAATGTGTTTGGAATGAGCCCAACATCTTCAACTGGAACAGGAGGAGGCTTCAATGACTCAAACAAAGGAGTGGTTCATTTGCAAGACACGAGCATGTTGCTAGTGTCCCTTGTTCTCACCCTTTTGCTAGTGCTGTTGAGGGTCTAA 648 0.4938 MALLMYFVLFLALAGHSSALYCVCKDGVGDQALQKAIDYACGAGADCTPILQNGACFQPNTVKDHCNYAVNSYFQRKGQAQGSCDFSGAATPSQTPPTAASTCVYPSSPSNAGTGTTATPTTTTPTTGTPPTTLTPTTPTSTTPGIGTGTGTTTGTGTGTGTTTGNPNVFGMSPTSSTGTGGGFNDSNKGVVHLQDTSMLLVSLVLTLLLVLLRV* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0499 215 SMART X8_cls 20 105 IPR012946 -
Gso1g0499 215 Pfam X8 domain 21 91 IPR012946 -
Gso1g0499 215 PANTHER BETA-1,3 GLUCANASE 1 152 IPR044788 -
Gso1g0499 215 Gene3D - 15 113 - -
Gso1g0499 215 MobiDBLite consensus disorder prediction 97 169 - -
Gso1g0499 215 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN PROTEIN 1 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0499 Gso-Chr1 7735921 7738321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0499 21 98 Glycoside Hydrolase AT2G01630 44.304 1.49e-20 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0499 - - gmx:100789955 290.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0499 1 7735921 7738321 Gso2g0974 2 11337133 11339431 GST
Gso7g1911 7 42448194 42450525 Gso1g0499 1 7735921 7738321 PCT
Gso1g0499 1 7735921 7738321 Gso7g1911 7 42448194 42450525 PCT