Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0497 ATGTCCGCCGAGAAAGAGAGAGAGACCCAGGTTTACTTGGCCAAGCTTGCCGAGCAGGCCGAGAGATACGAAGAAATGGTTGAGTGTATGAAGAAAGTAGCAAAACTTGATCTTGATCTAACTGTGGAAGAAAGGAACCTCCTCTCAGTGGGATACAAAAATGTGATTGGTGCACGAAGGGCCTCTTGGCGCATCATGTCCTCAATTGAGCAGAAGGAAGAGTCTAAGGGAAATGAGCACAATGTTAAACTGATCAAGAGTTACTGCCAAAAAGTTGAGGAGGAACTCTCCAAAATTTGTGGGGACATTCTGACTATTATAGACCAGCATTTGATTCCTTCTTCCGCATCAGCAGAAGCTAGTGTTTTCTACTATAAGATGAAAGGTGATTATTTTCGGTATCTTGCTGAGTTCAAGACTGACCAAGAAAGGAAAGAGGCAGCTGAACAGTCACTGAAAGGATACGAGGCTGCTTCAGCCACTGCAAACACAGATCTTCCATCAACACATCCAATCCGTCTTGGACTTGCACTCAATTTCTCTGTCTTTTATTATGAGATAATGAACTCTCCTGAAAGGGCCTGCCATTTGGCTAAGCAAGCTTTTGATGAGGCAATTGCGGAGTTGGACACCCTGAGTGAAGAGTCATACAAGGACAGCACTTTGATCATGCAGCTGTTGAGAGACAACCTGACTCTCTGGACCTCTGATTTGCCTGAGGATGGAGGTGAGGACAGCATAAAAGCTGAAGAAACCAAACCTTCTGAGCCTGAGCATTGA 780 0.4487 MSAEKERETQVYLAKLAEQAERYEEMVECMKKVAKLDLDLTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNEHNVKLIKSYCQKVEEELSKICGDILTIIDQHLIPSSASAEASVFYYKMKGDYFRYLAEFKTDQERKEAAEQSLKGYEAASATANTDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEDSIKAEETKPSEPEH* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0497 259 Coils Coil 13 33 - -
Gso1g0497 259 Pfam 14-3-3 protein 13 235 IPR023410 -
Gso1g0497 259 PIRSF 14-3-3 1 247 IPR000308 -
Gso1g0497 259 PANTHER 14-3-3 PROTEIN 3 254 IPR000308 -
Gso1g0497 259 Coils Coil 195 215 - -
Gso1g0497 259 Gene3D - 1 248 IPR036815 -
Gso1g0497 259 MobiDBLite consensus disorder prediction 241 259 - -
Gso1g0497 259 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Gso1g0497 259 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Gso1g0497 259 SMART 1433_4 7 249 IPR023410 -
Gso1g0497 259 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Gso1g0497 259 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Gso1g0497 259 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Gso1g0497 259 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Gso1g0497 259 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Gso1g0497 259 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Gso1g0497 259 MobiDBLite consensus disorder prediction 237 259 - -
Gso1g0497 259 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Gso1g0497 259 PANTHER BNAC03G57490D PROTEIN 3 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0497 Gso-Chr1 7704618 7708278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0497 2 253 14-3-3 family AT1G26480 85.714 3.36e-163 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0497 - K06630 gmx:100529130 511.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0497 1 7704618 7708278 Gso2g0972 2 11316783 11320568 GST
Gso7g1912 7 42464433 42468781 Gso1g0497 1 7704618 7708278 PCT
Gso1g0497 1 7704618 7708278 Gso7g1912 7 42464433 42468781 PCT