Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0485 ATGTCCAAGTATGGAACATCTCTATTGGTGCCTTCTGTTCATGAACTTGTGAAGCAACCTATCACCAAAGTTCCAGATCAATATCTTCATCCAAATCAAGATCCTCCTGATATATCTAACACAACCTTACCACAAGTTCCAGTCATCGACCTTAGTAAATTGTTATCTGAAGATGTCACTGAGCTAGAGAAGCTAGACGATGCATGCAAGGAATGGGGGTTCTTCCAGCTGATTAATCATGGAGTCAACCCTTCAATGGTGGAAAACGTGAAGAGAGATGTTCAAGAGTTTTTAAATCTTCCAATGGAAAAGAAGAAGCAATTTTGGCAAATCCCAGATGAATTGGAGGGTTTTGGCCAGTTGTTTGTTGTATCTGAGGATCAAAAGCTAGAATGGGCAGATATGTTCTTCATTCACACTCTTCCAATAAACGCAAGGAATCTTCGCTTATTTCCTAACTTTCCTCAACCATTGAGGGATAATATAGAGAACTATTCTTCGCAATTGAAAAAGCTTTGCCTCACAATCATTGAGCGTATGGCGATGGCTCTTAAGATTGAATCGAATGAACTGCTAGATTACGTGTTTGAAGATGTATTTCAAACAATGAGATGGACTTACTACCCTCCATGCCCTCAACCAGAAAATGTCATTGGAATAAATCCTCATTCAGATGCTTGTGCTCTTACCATTCTACTCCAAGCCAATGAAACAGAAGGCCTACAAATAAAAAAAGATGGAAATTGGATCCCTGTCAAACCCTTGCCTAATGCTTTTGTCATCAACGTTGGAGACATTTTGGAGATATTGACCAATGGGATTTACCGGAGCATCGAGCATCGAGCAACTATTAACAAAGAGAAAGAGAGAATTTCCGTTGCCACATTTCACAGGCCTCTAATGAACAAAGTTATAGGTCCAACACCCAGCCTTGTTACTTCTGAAAGAGCTGCAGTGTTCAAAAGAATTGCTGTTGAAGATTATTACAAAGCATACTTTTCTCGCGGGCTAAAAGGAAAATCATGCCTTGATTTGATCAGGGTCCAAAAATGA 1053 0.397 MSKYGTSLLVPSVHELVKQPITKVPDQYLHPNQDPPDISNTTLPQVPVIDLSKLLSEDVTELEKLDDACKEWGFFQLINHGVNPSMVENVKRDVQEFLNLPMEKKKQFWQIPDELEGFGQLFVVSEDQKLEWADMFFIHTLPINARNLRLFPNFPQPLRDNIENYSSQLKKLCLTIIERMAMALKIESNELLDYVFEDVFQTMRWTYYPPCPQPENVIGINPHSDACALTILLQANETEGLQIKKDGNWIPVKPLPNAFVINVGDILEILTNGIYRSIEHRATINKEKERISVATFHRPLMNKVIGPTPSLVTSERAAVFKRIAVEDYYKAYFSRGLKGKSCLDLIRVQK* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0485 350 SUPERFAMILY Clavaminate synthase-like 10 339 - -
Gso1g0485 350 Pfam non-haem dioxygenase in morphine synthesis N-terminal 46 142 IPR026992 -
Gso1g0485 350 Pfam 2OG-Fe(II) oxygenase superfamily 202 299 IPR044861 -
Gso1g0485 350 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 199 299 IPR005123 -
Gso1g0485 350 PANTHER 2OG-FE(II) OXYGENASE FAMILY OXIDOREDUCTASE 7 348 - -
Gso1g0485 350 Gene3D - 8 337 IPR027443 -
Gso1g0485 350 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 7 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0485 Gso-Chr1 7298164 7300363 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0485 12 348 Glycosyltransferase AT5G59530 32.857 3.05e-48 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0485 - - gmx:100797528 713.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0485 1 7298164 7300363 Gso2g0961 2 11133839 11137063 GST
Gso18g1153 18 21875949 21880668 Gso1g0485 1 7298164 7300363 PCT