Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0432 ATGGGTAGAGTAAAGCTAAAGATTAAGCGAATGGAAAATACCAATGGTCTTCTAGCAACCTATGCTAAAAGAAAGAATAGAATCATGAAGAAAGCCGCTGAATATTGGACTGACCTTGGTACGAGCAATAGTGTTGAACAATTGGGTCAAATGGAAAATTCACTCAAGGAATCACTTAATCAAATTAGAAGTCATAAGGAAAATATACAAAAGCAAGAATTTGCATCACTACAATGCAATAACCAGTTCAATGAAATGCATGTTCCATTCAGAATGGATGTTCAACAACATCTTCAACCTCTGTCATGGATTACTAATGGTGATAACCAAAATCTAGTTCTATCCGAGGACTCAAACTTGCTTCTTCATGAAGATATAGAGGGCTCGACAAGCTATTCTTTTAGGAGTTATGCCAATGATCATGGCTCAAGTACCAAAACACATATTTCAATTTCTAAGCAAGAAAATGGTATTCTTAGTGACTTGTGA 489 0.3558 MGRVKLKIKRMENTNGLLATYAKRKNRIMKKAAEYWTDLGTSNSVEQLGQMENSLKESLNQIRSHKENIQKQEFASLQCNNQFNEMHVPFRMDVQQHLQPLSWITNGDNQNLVLSEDSNLLLHEDIEGSTSYSFRSYANDHGSSTKTHISISKQENGILSDL* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0432 162 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL30 1 34 - -
Gso1g0432 162 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL30 40 162 - -
Gso1g0432 162 PANTHER MADS BOX PROTEIN 40 162 - -
Gso1g0432 162 PANTHER MADS BOX PROTEIN 1 34 - -
Gso1g0432 162 Coils Coil 48 68 - -
Gso1g0432 162 ProSiteProfiles MADS-box domain profile. 1 34 IPR002100 GO:0003677|GO:0046983
Gso1g0432 162 SUPERFAMILY SRF-like 1 35 IPR036879 GO:0003677|GO:0046983
Gso1g0432 162 SMART madsneu2 1 38 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0432 Gso-Chr1 5930148 5934082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0432 1 34 Type I MADS-box Gene Family AT2G03060 73.529 7.99e-10 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0432 - - gmx:102665922 326.635