Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0431 ATGCCGTCGATACTGAAACTCTTCTCCCTCCCAAAACCCTTAACCCTCAGACCGCAATTTTCGCGCCACCCGACAACAACCTCGGACCGTGGCCTCGTATTCCACGAAAAGGTGCTCTACCTTAAAGCCCTCAAAGTGAACCCCAACAAGGCCTTTCGCTTAAACCCCACCCTCCGCTCTTCCCCTCTCTCAACCCTAAAATCAGTGACGCGCTCCCTTTCTTCGTTGGGCATTCCACGCGCCGCCATGGGTCGCATCCTCGACATGCTCCCCGTGCTCCTCACGTGCGACCCCTATTTACAATTCTACCCCCTCCTCGACTTCCTCCTCCACGAGGTCCCGATCCTCTACCCCGACGTCCACCTCTCCATCCTGCGCAGCCCTAGGTTACTCGTTTGCAGCGTTAACAACCAATTGCGACCAACGTTGTGCTTTCTGAGGGAATTAGGGTTTAGTGGGCCCCACTCGCTCACGTGCCAGACGACCCTGCTGCTCGTTTCCAATGTGGAGGACACCCTTTTGCCCAAGATTGAGTTTTTGAAGGGTTTGGGGTTCACCCACGAAGAGGTTGCTAACATGGTCGTGAGGTCACCTGGGTTGTTGACTTTTAGTGTGGAGAAGAATTTGGGGCCGAAGGTGGAGTTTTTCTTGAGGGAGATGAATGGGGATGTTGCTGAGCTCAAGAGGTTTCCACAGTACTTCTCTTTTAGCTTGGAACGGAGAATTAAGCCGCGGTTTGGGATGCTAAGACGTGTTGGCGTGTCAATGAATTTGGAAGATATGTTGAAGGTTAGTGATGGCGGGTTTAATGCTAGGTTGGTTGATTCAACCTCGAGATTTTTTAGGTAA 849 0.5218 MPSILKLFSLPKPLTLRPQFSRHPTTTSDRGLVFHEKVLYLKALKVNPNKAFRLNPTLRSSPLSTLKSVTRSLSSLGIPRAAMGRILDMLPVLLTCDPYLQFYPLLDFLLHEVPILYPDVHLSILRSPRLLVCSVNNQLRPTLCFLRELGFSGPHSLTCQTTLLLVSNVEDTLLPKIEFLKGLGFTHEEVANMVVRSPGLLTFSVEKNLGPKVEFFLREMNGDVAELKRFPQYFSFSLERRIKPRFGMLRRVGVSMNLEDMLKVSDGGFNARLVDSTSRFFR* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0431 282 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTIC 19 278 - -
Gso1g0431 282 Gene3D Transcription termination factor 3, mitochondrial 33 282 IPR038538 -
Gso1g0431 282 SMART mt_12 224 255 IPR003690 GO:0003690|GO:0006355
Gso1g0431 282 SMART mt_12 121 152 IPR003690 GO:0003690|GO:0006355
Gso1g0431 282 SMART mt_12 155 186 IPR003690 GO:0003690|GO:0006355
Gso1g0431 282 SMART mt_12 84 116 IPR003690 GO:0003690|GO:0006355
Gso1g0431 282 SMART mt_12 49 79 IPR003690 GO:0003690|GO:0006355
Gso1g0431 282 SMART mt_12 191 223 IPR003690 GO:0003690|GO:0006355
Gso1g0431 282 PANTHER CGI-12 PROTEIN-RELATED 19 278 IPR003690 GO:0003690|GO:0006355
Gso1g0431 282 Pfam mTERF 56 269 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0431 Gso-Chr1 5923699 5925054 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gso1g0431 mTERF 7.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0431 K15032 - gmx:100794204 560.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0431 1 5923699 5925054 Gso2g0915 2 10461704 10464199 GST