Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0409 ATGCGCCGATCGAATGCCCGCACTCGCAGCGCCGCCTCCAATCTCAACAACAACAACGAATTAATGGATCCGATCAAAACCAAAACCCGCTCCACCAACCTCTTCACTCGTAACCCTAAGGCCGCGCAATCAAAGTCCCTCCGTTCCATAATCCTCGTCTCCCTCGCGCTCTCCTTCCTCTTCCTCGTTTCCTACTTCGCCTTCTCCCCGCCGGAGGCCAATTTCCGGTACCGGATCATCGTGGACGGCGGGAGCACGGGCACGCGCGTGCACGTGTTTAAATACAGGTCTGGTAGGGCGCTGGAGTTCTCCGGGAGGGAGGGGTTGAAGTCGATGCGGGTGAACCCGGGGCTGTCGGCGTTCGCGGAGGATCCGGAGGGCGCGGGCGGGTCTGTGGCAGAGCTGGTGGAGTTCGCGAAGCGGTGGATCCCGAGGGAGAGCTGGGGGGAGACGGAGATAAGGCTGATGGCCACGGCGGGGCTGAGGATGCTCGACGCGGCGGCGCAGGAGAGGATTCTAGCGTCGTGCAGGAAGGTGGTGCGTGACTCCGGATTCATGTTTAGGGACGAATGGGCTTCTGTTATCACAGGTTCTGATGAAGGAGTGTATGCTTGGGTTGTTGCTAATTATGCACTTGGCACTCTTGGAGGTGATCCTTTGGAAACAACTGGGATTATTGAACTTGGTGGTGCTTCTGCTCAGGTGACCTTTGTATCAAGAGAAGCAGTGCTGCCTTCATTTTCACGAACTGTTAAATTTGGGAATACCACCTACAACCTTTACAGCCACAGCTTTCTTCATTTTGGCCTGAATGCTGCTCAGGACTCGTTGAAAGAAGCACTTGTATTGGGAGAATTTAACTTAGCTTCTCAATCTCTTCAAAAAGGGTTGCGGATAGATCCTTGTACTCCTACAGGATACTCTTATAATGTTGAATCATGGAAGTTCCCTCCTAGCTCAGAGAGTGAAAAAAACCAATATCAGTCCACTGTACAAGCCAGGGGAAACTTTTCAGAGTGCAGATCTGTAGCACTAACACTGCTACAAAAAGGGAAAGAATCATGTTCCTATCAGCACTGTGACATAGGATCAAATTTCATACCAAAGCTTCAGGGGAAATTTTTGGCCACAGAAAATTTCTTTTACACATCAAAGTTTTTTGGATTGACGCCAAGGGCCTATCTGTCCAAGTTGATGAATGCTGGGAAAGAATTCTGTGGCAAGGATTGGTTAAGGCTGAAGAAAAAATATGTCTCCCATGATGAGGAAGATTTACTTCGGTATTGCTTCTCTTCAGCATACATTGTTGCTCTGCTTCACGACAGTCTTGGAATTGCTTTGGATGATGAGAGGGTCAAGGTTGCTAATCAGGTGGGAAGTATTCCGCTTGATTGGGCTTTGGGAGCTTTTATTCTGCAAACAGCAGCTGACGCAGATATAAAGAACCATAATTGGATTGCCACCATTTTCAGTGATGAATCACATACTCTCCTCTCAATTATTGGAATTTTTATAGTGTTGTTAACGGCATGGTCTATATCTAGGTGGAGGAAACCTCAGTTGAAGACAATTTACGATCTAGAAAAGGGACGATATATTATCACACGAGTTGGTAGATAA 1620 0.484 MRRSNARTRSAASNLNNNNELMDPIKTKTRSTNLFTRNPKAAQSKSLRSIILVSLALSFLFLVSYFAFSPPEANFRYRIIVDGGSTGTRVHVFKYRSGRALEFSGREGLKSMRVNPGLSAFAEDPEGAGGSVAELVEFAKRWIPRESWGETEIRLMATAGLRMLDAAAQERILASCRKVVRDSGFMFRDEWASVITGSDEGVYAWVVANYALGTLGGDPLETTGIIELGGASAQVTFVSREAVLPSFSRTVKFGNTTYNLYSHSFLHFGLNAAQDSLKEALVLGEFNLASQSLQKGLRIDPCTPTGYSYNVESWKFPPSSESEKNQYQSTVQARGNFSECRSVALTLLQKGKESCSYQHCDIGSNFIPKLQGKFLATENFFYTSKFFGLTPRAYLSKLMNAGKEFCGKDWLRLKKKYVSHDEEDLLRYCFSSAYIVALLHDSLGIALDDERVKVANQVGSIPLDWALGAFILQTAADADIKNHNWIATIFSDESHTLLSIIGIFIVLLTAWSISRWRKPQLKTIYDLEKGRYIITRVGR* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0409 539 CDD NBD_sugar-kinase_HSP70_actin 79 238 - -
Gso1g0409 539 Gene3D Exopolyphosphatase. Domain 2 196 459 - -
Gso1g0409 539 MobiDBLite consensus disorder prediction 7 32 - -
Gso1g0409 539 MobiDBLite consensus disorder prediction 1 32 - -
Gso1g0409 539 Gene3D - 76 471 - -
Gso1g0409 539 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 41 535 IPR000407 GO:0016787
Gso1g0409 539 PANTHER APYRASE 6-RELATED 41 535 - -
Gso1g0409 539 Pfam GDA1/CD39 (nucleoside phosphatase) family 73 475 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0409 Gso-Chr1 5540587 5548731 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0409 38 475 Nodulin-like Gene Family AT4G19180 27.813 7.81e-46 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0409 K01510 - gmx:100807287 1023.46