Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0402 ATGGACGTTTCCGAGCTCGCCAAGAAGCTCGGTCTCTCCGATTCCAAACTCGTTGTACGGAAAGCTGCCGAGCTCCGTCGCCTCTGCGAAGTCCAGTTCGATTCCTCCGTCATTGGAGTCGGCGAGGTTGCAAAATCTATCATATGCTTGGAAATCGCCGCCATGAGACTCAGCATTCTCTTCGACCGATCCTCTGCGGCGAGGCTGAGCGGAATGTCCGAAAGAGCTTACATCAGATCCTACAATTCACTCCACAACGGCCTTGGCGTCAAGATGAAGTTAGATGTGAGGGAATTGGCGATTCAGTTTGGTTGCGTTCGCATTATTACTCTAGTTCGCGACGGTCTTAAATTATATAAGGATCGGTTTGTTTCGTCGTTGCCGGCTTCTCGTCGTGCAAGCGCTGATTTCACGCGTCCAGTGTTCACTGCTGTCGCTTTTTATCTATGTGCTAAGAAACACAAGCTTAAAGTGGACAAACTTAAGTTAATTGAGCTCTGTGGTACATCTGAATCTGAGTTTTCTAGTGTTTCTGCTACTATGAAGGATTTGTGCCATGATGTTTTTGGGGTTGCGAAGGAAAAGAAGGATCCTAAGCAAGTGCAGTCAAATCGAGATTTGCTTGATGTTTTGCCAAGTAAAAGGAAAGCTGAGGATGGTGGTTATTCATCCGATGATGGTCCAGAGCAGCTTTCAAGTTATAAAAAAGCCAAGAAAATGGAAAAACGTGATTTTGAGAAATGGAAATCTTCTGTGCTTGCATCCAATGAACAAAACAAGAAAGCGCCTTGCAAGCGAACCAGACAGACTAGTCTCAACTTTCTCAACAAAGCTTCCGATAATCAAGAGTTGGAGGCAATGTGA 864 0.4549 MDVSELAKKLGLSDSKLVVRKAAELRRLCEVQFDSSVIGVGEVAKSIICLEIAAMRLSILFDRSSAARLSGMSERAYIRSYNSLHNGLGVKMKLDVRELAIQFGCVRIITLVRDGLKLYKDRFVSSLPASRRASADFTRPVFTAVAFYLCAKKHKLKVDKLKLIELCGTSESEFSSVSATMKDLCHDVFGVAKEKKDPKQVQSNRDLLDVLPSKRKAEDGGYSSDDGPEQLSSYKKAKKMEKRDFEKWKSSVLASNEQNKKAPCKRTRQTSLNFLNKASDNQELEAM* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0402 287 CDD Orc6_mid 93 188 - -
Gso1g0402 287 PANTHER BNAC05G50940D PROTEIN 1 281 - -
Gso1g0402 287 Pfam Origin recognition complex subunit 6 (ORC6) 4 91 IPR008721 GO:0003677|GO:0005664|GO:0006260
Gso1g0402 287 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 6 1 281 IPR020529 GO:0005664|GO:0006260
Gso1g0402 287 MobiDBLite consensus disorder prediction 215 287 - -
Gso1g0402 287 MobiDBLite consensus disorder prediction 251 287 - -
Gso1g0402 287 MobiDBLite consensus disorder prediction 231 250 - -
Gso1g0402 287 Gene3D - 92 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0402 Gso-Chr1 5374473 5381797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0402 1 285 Core DNA Replication Machinery Family AT1G26840 63.860 1.91e-132 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0402 K02608 - gmx:100795599 551.977