Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0376 ATGAAGAATTTCTTGGTTTCTTTGTACTACTTGTTTCCTGCAATCATTGCAATCATTCTTGTGCTGCTCACTCCAATTCCAAGTGCACAGCTAACGACAAGTGAGAACAGAATCCTTCTCCAAGTTCAGAAGCTTCTTGAATACCCTCAAGCTCTTCATGGATGGACCAACTTGACCAATTTCTGCTCCCTCCCTTCCTCTCCTTCTCTCAATATTGTGTGCTCCAATGGCCATGTAACCGAGTTAACTGTCGTTGGAAATTCATCTGAGACTCTCTCAGAAAGATTCTCCATTGAGTCTTTCTTTACTGTCTTGACAAAGCTCTCAAATCTGAAGGTGTTGTCATTGGTGTCACTTGGTTTGTGGGGTCCCTTGCCCTCCAAGATTGACAGGTTCTGGTCTCTTGAAGTGATGAACTTTAGCTCAAACTTCATTTATGGGGAAATCACACCTTCAGTGTCCTCTTTGAAGAATCTAAAAAGTCTTGTTTTGGCTGATAATCTTTTCAATGGAAGTGTGCCTGATCTTGGAAAACTAGCTTCTCTTGAAGAGCTCAATTTGAGTGGCAACAAATTAGGCCCTGAGTTCCCTTCATTGAGCAAGAATCTTGTGAGGGTTATCTTGAGAAACAACTCTTTGAGATGTAGAATCCCTCCTCAACTCATGCATGTTTATAAACTTGAGCTGTTTGACATCTCTTCCAATGTGATATTTGGAAATATCCCGTCATTTATTTTCTCTCTTCCTTCCCTCAAGTACCTAAAGTTGGCTTCAAACCAATTAAGTGGTTCCCTTTCTTTGAATGTGTCATGTAGTTCTTCTCTGACTTTTGTTGATATCTCACACAACCTCTTGGTGGGAACATTGCCATCTTGCGTTGGTTCAAAGGCTTCAAACCGAACAACACTTTATTATGGGAATTGTTTGATAAACAGAAGCTTAAGTGATCAATATCCATCTTCTTATTGCCAGAAAGTGGAGGCCTTAGCTGTTATTAAGCCATCAATTAAAAGCCAGAAGAAGGAACCAGAGATGCAACTAGGCCAAATTCTTGGTATTGTTGGAGGTGTTGTGGGAATTTCCGGGCTTCTGGCTCTTCTCATTTGGTGCATCTTCAGAAAGTCCAAACCAGAAAAAGCAGACAGTGATTATAGCATAGACATCTCTGCTCCAGATAATTTCTCTGTCCGTGCTTATCCAAGACCAAATATTAATGCAAGACGTCCTCCTCTACCAATGAGGCAACCTTTTCTTGGATTCCCACCATACTGCATTTTCTCATTAGAAGAAATTGAAGATGCTACAAACAACTTTGACCCATCAAATCTTATAGCAGAAGGATCACAGGGACAGCTATATAAAGGTTGGCACATAGATGGTTCAATGGTCATGGTCAATTGCGTGAAACTAAAGCAGAAAAGTTTATACAAAAACAGTATTCAGAGCTTGAAGGTATTGCCCTATTTAAGGCACAGGAATTTGGTGAGTGTTCTAGGACACTGTATCATTACTCATCAGGACCGTCCCCAAATGATAAGCACAGTATTCATTGTATTTGAACATGTCTCAAACGTGTCATTGAGGGATTACCTTGCAGATAGGAGAAAAAGGGAAATGCTGAAATGGCCACAAAGAATGGAAATCAGCATAGGCATTGGAAGAGGAATCCAGTTCTTACACACCAGAGTTCATCCTGGCATATTTGGCAACAATATAAAGATTGAGAATATTCTGTTGGATGATTGTCTCAACGGAAAAGTTAGTGGATACAGCATTCCATGGCCGTCCAAGAAAGGTCATAACAGCAAACTTTGTGAACAAAGATCCACTAATCAAATTGGAAGCATTGATGATGCAGAAAAGGAAGACATCTATCAGTTTGGTGTTATTCTACTTCAAGTTATCACTGGCAAACTAATTACATCTTCCAGTGAAGTAGAGGAGGTGAAGGATGAGCTGGAGAGAGGTTTAGCAGAAGCTGCATCACCATCTCTGAGGGGTGCATCACCATCACTAAAGGGTACATCACCGATACTAAAGGGCGTGTTCGATTCTTCCCTCCGGGAGACTTGTGTGTATGAATCATTGAAGACTGCAGTTCAGATCACCATCAGTTGTCTCAGCAAGGTTTCAAGTAATCGCCCTTCAATAGAGGATGTTCTCTGGAATTTGCAGTACTCCATGCAAGTTCAAGAGCCAAGGACCAGCGGTGTACACCTCTTTTCAAAAATGTAA 2235 0.4098 MKNFLVSLYYLFPAIIAIILVLLTPIPSAQLTTSENRILLQVQKLLEYPQALHGWTNLTNFCSLPSSPSLNIVCSNGHVTELTVVGNSSETLSERFSIESFFTVLTKLSNLKVLSLVSLGLWGPLPSKIDRFWSLEVMNFSSNFIYGEITPSVSSLKNLKSLVLADNLFNGSVPDLGKLASLEELNLSGNKLGPEFPSLSKNLVRVILRNNSLRCRIPPQLMHVYKLELFDISSNVIFGNIPSFIFSLPSLKYLKLASNQLSGSLSLNVSCSSSLTFVDISHNLLVGTLPSCVGSKASNRTTLYYGNCLINRSLSDQYPSSYCQKVEALAVIKPSIKSQKKEPEMQLGQILGIVGGVVGISGLLALLIWCIFRKSKPEKADSDYSIDISAPDNFSVRAYPRPNINARRPPLPMRQPFLGFPPYCIFSLEEIEDATNNFDPSNLIAEGSQGQLYKGWHIDGSMVMVNCVKLKQKSLYKNSIQSLKVLPYLRHRNLVSVLGHCIITHQDRPQMISTVFIVFEHVSNVSLRDYLADRRKREMLKWPQRMEISIGIGRGIQFLHTRVHPGIFGNNIKIENILLDDCLNGKVSGYSIPWPSKKGHNSKLCEQRSTNQIGSIDDAEKEDIYQFGVILLQVITGKLITSSSEVEEVKDELERGLAEAASPSLRGASPSLKGTSPILKGVFDSSLRETCVYESLKTAVQITISCLSKVSSNRPSIEDVLWNLQYSMQVQEPRTSGVHLFSKM* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0376 744 Gene3D Ribonuclease Inhibitor 198 347 IPR032675 -
Gso1g0376 744 PANTHER OS07G0166700 PROTEIN 3 743 IPR045272 GO:0004714|GO:0006468
Gso1g0376 744 SUPERFAMILY L domain-like 39 311 - -
Gso1g0376 744 SUPERFAMILY Protein kinase-like (PK-like) 411 724 IPR011009 -
Gso1g0376 744 Pfam Protein kinase domain 442 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso1g0376 744 Gene3D Phosphorylase Kinase; domain 1 418 511 - -
Gso1g0376 744 Gene3D Transferase(Phosphotransferase) domain 1 522 738 - -
Gso1g0376 744 ProSiteProfiles Protein kinase domain profile. 438 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso1g0376 744 ProSiteProfiles Leucine-rich repeat profile. 181 203 IPR001611 GO:0005515
Gso1g0376 744 Gene3D Ribonuclease Inhibitor 32 197 IPR032675 -
Gso1g0376 744 PANTHER RECEPTOR-LIKE KINASE FAMILY PROTEIN, PUTATIVE-RELATED 3 743 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0376 Gso-Chr1 4759192 4762790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0376 29 650 Miscellaneous Gene Families AT2G02780 48.523 3.37e-173 511
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Gso1g0376 Pkinase 1.1e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0376 - - gmx:100800018 1399.8